DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp420

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_038949649.1 Gene:Zfp420 / 103690163 RGDID:2323829 Length:578 Species:Rattus norvegicus


Alignment Length:467 Identity:136/467 - (29%)
Similarity:195/467 - (41%) Gaps:71/467 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 YACKFCLRPQENYQLQQLLLEH------------------INAS--------HDPEQPYNCPECE 225
            |.||.|  .:...|..||:|.|                  |.:|        |..|:|:.|.||.
  Rat    85 YTCKEC--GKAFTQSSQLILHHRIHTGEKPYKCEACGKAFIRSSQLSRHQKVHTGEKPFECKECG 147

  Fly   226 ARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSL 290
            ..|...:..|:|.:....||.:.|..|.|.:.....|..|...:..|..:||..|.|.|.....|
  Rat   148 KAFTQNSQLTLHQRLHTGEKLYDCKECRKVFTQLSQLILHRRIHTGEKPYECKECGKAFICGSQL 212

  Fly   291 NYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCG---------------- 339
            :.|.|.||.::.::|:.  |.:.||....||.|:..|:|....|.:.||                
  Rat   213 SQHQKTHNGEKPYECKE--CGKAFIRGSLLMQHQRIHTGEKPYKCDECGKAFIRGSQLTQHQRIH 275

  Fly   340 ---------FCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAI 395
                     .|||||.|...|..| .|.|.|||||:|..|.:.|     .|..:|.||:...|..
  Rat   276 TNEKPYECKECGKTFSHGSQLTQH-QRIHTGEKPYQCKECGKAF-----NRGSLLTRHQRIHTGE 334

  Fly   396 ERSECMLCRQPFSSEPDLIHHMSAEHLQRP------GAPIIANNKRVLQQKRERQYSGLFQCGSC 454
            :..:|..|.:.||...:|..|......::|      |...| ...::.|.:|.......::|..|
  Rat   335 KPYKCKECGKDFSRGSELTQHERIHTGEKPYECKECGKSFI-RGSQLTQHQRIHTGEKPYECKEC 398

  Fly   455 SQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKY 519
            ...|...|.|.:|..:|: .::|:.|..|.|.|.|...:..|.:.|..|||..|..|||||....
  Rat   399 RMAFTQSSHLSQHQRLHT-GEKPYVCSECGKAFARGLLLIQHQRIHTGEKPYECRECGKAFIRGS 462

  Fly   520 VLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQK 584
            .||||:.:| ..||.::|..||:|:.....|.||||.|||:..|:|..|::.|.....|..| |:
  Rat   463 QLTQHQRTH-TGEKPYECRECGKAFGHGSQLTLHQRVHTGEKPYECKECRKAFAQSSHLSRH-QR 525

  Fly   585 AHAASQPHSADQ 596
            .|...:|:...:
  Rat   526 VHTGEKPYQCKE 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 98/366 (27%)
C2H2 Zn finger 221..241 CDD:275368 6/19 (32%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 11/45 (24%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 10/19 (53%)
C2H2 Zn finger 537..557 CDD:275368 9/19 (47%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zfp420XP_038949649.1 COG5048 14..462 CDD:227381 108/388 (28%)
C2H2 Zn finger 31..51 CDD:275368
C2H2 Zn finger 59..79 CDD:275368
C2H2 Zn finger 87..107 CDD:275368 8/21 (38%)
C2H2 Zn finger 115..135 CDD:275368 2/19 (11%)
C2H2 Zn finger 143..163 CDD:275368 6/19 (32%)
C2H2 Zn finger 171..191 CDD:275368 5/19 (26%)
C2H2 Zn finger 199..219 CDD:275368 7/19 (37%)
C2H2 Zn finger 227..247 CDD:275368 7/21 (33%)
C2H2 Zn finger 255..275 CDD:275368 2/19 (11%)
C2H2 Zn finger 283..303 CDD:275368 9/20 (45%)
C2H2 Zn finger 311..331 CDD:275368 7/24 (29%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
C2H2 Zn finger 367..387 CDD:275368 4/20 (20%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
C2H2 Zn finger 423..443 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 10/19 (53%)
zf-H2C2_2 464..488 CDD:404364 11/24 (46%)
C2H2 Zn finger 479..499 CDD:275368 9/19 (47%)
zf-H2C2_2 492..516 CDD:404364 12/23 (52%)
C2H2 Zn finger 507..527 CDD:275368 6/20 (30%)
zf-H2C2_2 519..544 CDD:404364 5/20 (25%)
C2H2 Zn finger 535..555 CDD:275368 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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