DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp420

DIOPT Version :10

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_038949669.1 Gene:Zfp420 / 103690163 RGDID:2323829 Length:529 Species:Rattus norvegicus


Alignment Length:399 Identity:107/399 - (26%)
Similarity:168/399 - (42%) Gaps:57/399 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 QQQYDEEVEEPITDESAPPQLTISYACKFCLRPQENY-QLQQLLLEHINASHDPEQPYNCPECEA 226
            |.|.....:||:..|..|..:            |:.: .|.|::        :.|:||.|.:|..
  Rat   187 QLQNGHGSQEPLAREYMPTFV------------QQTFLTLHQII--------NDEKPYECKKCRK 231

  Fly   227 RFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSLN 291
            .|...:....|.:....||.:.|..|||.:....::..|::.:..|..|||..|.|.|.....|:
  Rat   232 VFTQNSQFIQHQRIHIGEKSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKDCGKAFSCSSYLS 296

  Fly   292 YHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIY 356
            .|.:.|...:.::|:  .|.:.|....:|:.|:..|:|   .|...|..|||.|.....|..|: 
  Rat   297 QHQRIHTGKKPYECK--DCGKAFSYCSNLIDHQRIHTG---EKPYACKVCGKAFTKSSQLFQHV- 355

  Fly   357 RQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEH 421
            |.|.|||||:|..|.:.|...::     |.:|:...|..:..||..|.:.|||...|.:|.....
  Rat   356 RVHTGEKPYECKECGKAFTQSSK-----LVQHQRIHTGEKPYECKECGKAFSSGSALTNHQRIHT 415

  Fly   422 LQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKR 486
            .::|                       ::|..|.:.|...|.|.:|..:|: .::|..|..|.|.
  Rat   416 GEKP-----------------------YECKDCGKAFTQSSQLRQHQRIHA-GEKPFECLECGKA 456

  Fly   487 FKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLR 551
            |.:...:..|.:.|..|||..|:.|||||.....||:|..:|.. :|...||.||:.:..|..|.
  Rat   457 FTQNSQLFQHQRVHSDEKPYECNKCGKAFNKCSNLTRHLRTHRD-DKPCSCNECGKTFSNESELI 520

  Fly   552 LHQRTHTGK 560
            .||..|:.:
  Rat   521 RHQEVHSNE 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..88 CDD:462262
COG5048 198..>508 CDD:227381 80/310 (26%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 8/20 (40%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
SUF4-like 536..>586 CDD:411020 9/25 (36%)
C2H2 Zn finger 537..558 CDD:411020 8/20 (40%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..586 CDD:411020
C2H2 Zn finger 565..582 CDD:275368
Zfp420XP_038949669.1 KRAB 66..127 CDD:214630
zf-C2H2 224..246 CDD:395048 5/21 (24%)
C2H2 Zn finger 226..246 CDD:275368 4/19 (21%)
zf-H2C2_2 241..263 CDD:463886 7/21 (33%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 266..291 CDD:463886 8/24 (33%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
COG5048 <285..529 CDD:227381 80/279 (29%)
C2H2 Zn finger 310..330 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..358 CDD:275368 8/20 (40%)
C2H2 Zn finger 366..386 CDD:275368 5/24 (21%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..442 CDD:275368 6/19 (32%)
C2H2 Zn finger 450..470 CDD:275368 5/19 (26%)
C2H2 Zn finger 478..498 CDD:275368 9/19 (47%)
C2H2 Zn finger 506..526 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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