DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Znf354b

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_006246421.1 Gene:Znf354b / 102556119 RGDID:7562538 Length:625 Species:Rattus norvegicus


Alignment Length:584 Identity:150/584 - (25%)
Similarity:228/584 - (39%) Gaps:138/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QEDLEPAEEHQET------------ETTKPTTTVSAETQ----------------------PNNT 136
            |:..||.:..:|:            :|||.|.|..:..|                      |:|:
  Rat    91 QQGEEPWKAEKESHGCSSLGCNSSLQTTKSTQTKESSFQELKRKQLKRDEDWDFTSGKSCRPDNS 155

  Fly   137 -----ASDPIEI-------------------FVDAVDIDEAEEEEEEEEQQQQYDEEVEEPITDE 177
                 .::.::|                   |..:|.:....:::...|:.|:  ..::|..|..
  Rat   156 FKKQNKNESLQIISITHTKILTVDKSHKNFEFGPSVSLKSISKQKIAREKTQR--NSLKENSTSL 218

  Fly   178 SAPPQLTIS--YACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKS 240
            :.|...|:.  :.|..|   ::.:.....|.:|:. :|..|:.:.|.:|...|..:::...|.::
  Rat   219 NQPKIKTLEKRFKCSTC---EKAFIHSSSLRKHLK-NHSGERLFQCKDCLKAFSQSSALIQHQRT 279

  Fly   241 SHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSLNYHMKWH-------- 297
            ...||.:.|..|||.:....:|..|:..:..|..:.|..|.|.|..|.||..|.|.|        
  Rat   280 HTGEKPYICNECGKAFSHSASLCKHLRTHTLEKSYTCKECGKSFSRRSSLFLHQKIHARENPHRY 344

  Fly   298 NPDRQFKCRHSGCERLFISQRHLMC---------------HEATHSGTSSRKSEHCGFCGKTFIH 347
            ||.|:.....|||:|....::..:|               |:..|:|   .|...|..||:.|..
  Rat   345 NPGRKASASLSGCQRAHSRKKTYLCNECGNTFKSSSSLRYHQRIHTG---EKPFRCSECGRAFSQ 406

  Fly   348 LKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPD 412
            ..:|..| .|.|.|||||:|..|.:.|.|     |..|.|||...|..:...|..|.:..||...
  Rat   407 SASLIQH-ERIHTGEKPYRCGECGKGFTS-----ISRLNRHRIIHTGEKLYNCNECGKALSSHST 465

  Fly   413 LIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSG--LFQCGSCSQRFNMKSALERHAAVHSEKD 475
            ||.|                         ||.::|  ..:|..|.:.|...|||.:|..:|: .:
  Rat   466 LIIH-------------------------ERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHT-GE 504

  Fly   476 RPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVC 540
            ||:.|..|.|.|:....:..|.:.|..|||..|..||.:|.....|.||:..| ..||.||||.|
  Rat   505 RPYKCNECGKTFRCNSSLSNHQRIHTGEKPYQCIECGMSFGQSAALIQHQRIH-TGEKPFKCNTC 568

  Fly   541 GRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQPLDDLINI 604
            ||::....||..|||.|||:..|:|..|.:.|.....|..| .|.|..          :|.:||
  Rat   569 GRSFRQSSSLIAHQRIHTGEKPYECSACGKLFSQRSSLTNH-YKIHIE----------EDSLNI 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 91/334 (27%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 9/19 (47%)
C2H2 Zn finger 305..327 CDD:275368 6/36 (17%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 5/16 (31%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
C2H2 Zn finger 537..557 CDD:275368 10/19 (53%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Znf354bXP_006246421.1 KRAB 38..97 CDD:214630 2/5 (40%)
KRAB 38..77 CDD:279668
COG5048 206..609 CDD:227381 128/444 (29%)
C2H2 Zn finger 232..252 CDD:275368 4/23 (17%)
zf-H2C2_2 244..269 CDD:290200 7/25 (28%)
C2H2 Zn finger 260..280 CDD:275368 4/19 (21%)
zf-H2C2_2 272..297 CDD:290200 7/24 (29%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
zf-C2H2 314..336 CDD:278523 9/21 (43%)
C2H2 Zn finger 316..336 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 2/19 (11%)
zf-H2C2_2 381..406 CDD:290200 8/27 (30%)
C2H2 Zn finger 397..417 CDD:275368 7/20 (35%)
zf-H2C2_2 409..434 CDD:290200 12/25 (48%)
C2H2 Zn finger 425..445 CDD:275368 9/24 (38%)
C2H2 Zn finger 453..473 CDD:275368 9/44 (20%)
zf-H2C2_2 466..490 CDD:290200 9/48 (19%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
zf-H2C2_2 493..518 CDD:290200 10/25 (40%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
zf-H2C2_2 521..544 CDD:290200 8/22 (36%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
zf-H2C2_2 549..574 CDD:290200 13/25 (52%)
C2H2 Zn finger 565..585 CDD:275368 10/19 (53%)
zf-H2C2_2 577..602 CDD:290200 12/24 (50%)
C2H2 Zn finger 593..613 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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