DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and Rex2

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001171238.1 Gene:Rex2 / 100043034 MGIID:1328322 Length:685 Species:Mus musculus


Alignment Length:585 Identity:149/585 - (25%)
Similarity:234/585 - (40%) Gaps:111/585 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 HQETETT------KPTTTVSAETQPNNTASDP-IEIFVDAVD------IDEAEEEEEEEEQQQQY 166
            |:.:|:|      :..|..|:..:.:.|.:.. :..:.|.|:      |....:....|:::...
Mouse   111 HESSESTPYNTNHRDATLQSSNLKRHKTGTTKGVCTYKDCVNCLKGSSIISLNQGTHIEKKEHNR 175

  Fly   167 DEEVEEPITDESAPPQLTISYAC-KF--CLRPQENYQLQQLL------------------LEHI- 209
            ::.::|.:.......::. :|.| :|  |....:|.|.||.:                  ..|: 
Mouse   176 NKNLDEVLVSRQNNSEMN-TYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQTSHLS 239

  Fly   210 --NASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSE 272
              :..|..|:||.|.||:..|.|..:...|.:....||.:.|..|.|.:.|:..||.|...:..|
Mouse   240 IHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCSECDKCFTDKCTLRKHQRIHTGE 304

  Fly   273 TDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEH 337
            ..::|..|:|.|..:.||..|.:.|..::.:||  |.|::.|....||..|...|||   .|...
Mouse   305 KPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKC--SECDKCFTQPSHLSIHRRIHSG---EKPYK 364

  Fly   338 CGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANC----TEVFASYAEKRIHMLER----------- 387
            |..|.|.|....|||.| .|.|.|||||||:.|    ||.|.....:|||..|:           
Mouse   365 CSECDKCFTDKCTLRKH-QRIHTGEKPYKCSECDKCFTEKFTLRKHQRIHTGEKPYKCNECDKCF 428

  Fly   388 --------HRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRP------------GAPIIAN 432
                    |:...|..:..:|..|.:.|:....|..|......::|            .:|:..:
Mouse   429 TDKGSLRVHQRIHTGEKPYKCSECDKCFTKPSHLSIHRRIHSGEKPYKCSECDKCFTQPSPLSIH 493

  Fly   433 NK-----------------------RVLQQKR--ERQYSGLFQCGSCSQRFNMKSALERHAAVHS 472
            .:                       ||.|:..  |:.|    :|..|.:.|...|.|..|..:||
Mouse   494 RRIHSGEKPYKCSECDKCFTDKGSLRVHQRIHIGEKPY----KCSECDKCFTQPSHLSIHCRIHS 554

  Fly   473 EKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKC 537
             .::|:.|..|.|.|.....::.|.:.|..|||..|..|.|.|..|..|.:|:..| ..||.:||
Mouse   555 -GEKPYKCSECDKCFTHKGSLRVHHRIHAGEKPYKCSECDKCFTEKNGLRRHQRIH-TGEKPYKC 617

  Fly   538 NVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQPLDDLI 602
            :.|.:.:..:..|.:|||.|||:..|||..|.:.|.....|..| ||.|:.....:|....:.|:
Mouse   618 SECDKCFTRKSHLSIHQRIHTGEKLYKCSECDKCFTQQCHLSIH-QKIHSGENLTNAMNATNALV 681

  Fly   603  602
            Mouse   682  681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 102/390 (26%)
C2H2 Zn finger 221..241 CDD:275368 6/19 (32%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 7/20 (35%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Rex2NP_001171238.1 KRAB 27..67 CDD:366587
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 229..245 CDD:275368 1/15 (7%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 277..666 CDD:227381 115/401 (29%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..357 CDD:275368 7/21 (33%)
C2H2 Zn finger 365..385 CDD:275368 9/20 (45%)
C2H2 Zn finger 393..413 CDD:275368 6/19 (32%)
C2H2 Zn finger 421..441 CDD:275368 1/19 (5%)
C2H2 Zn finger 449..469 CDD:275368 5/19 (26%)
C2H2 Zn finger 477..497 CDD:275368 1/19 (5%)
C2H2 Zn finger 505..525 CDD:275368 3/19 (16%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
C2H2 Zn finger 561..581 CDD:275368 5/19 (26%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
C2H2 Zn finger 617..637 CDD:275368 6/19 (32%)
C2H2 Zn finger 645..665 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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