DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Rex2

DIOPT Version :10

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001171238.1 Gene:Rex2 / 100043034 MGIID:1328322 Length:685 Species:Mus musculus


Alignment Length:585 Identity:149/585 - (25%)
Similarity:234/585 - (40%) Gaps:111/585 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 HQETETT------KPTTTVSAETQPNNTASDP-IEIFVDAVD------IDEAEEEEEEEEQQQQY 166
            |:.:|:|      :..|..|:..:.:.|.:.. :..:.|.|:      |....:....|:::...
Mouse   111 HESSESTPYNTNHRDATLQSSNLKRHKTGTTKGVCTYKDCVNCLKGSSIISLNQGTHIEKKEHNR 175

  Fly   167 DEEVEEPITDESAPPQLTISYAC-KF--CLRPQENYQLQQLL------------------LEHI- 209
            ::.::|.:.......::. :|.| :|  |....:|.|.||.:                  ..|: 
Mouse   176 NKNLDEVLVSRQNNSEMN-TYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQTSHLS 239

  Fly   210 --NASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSE 272
              :..|..|:||.|.||:..|.|..:...|.:....||.:.|..|.|.:.|:..||.|...:..|
Mouse   240 IHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCSECDKCFTDKCTLRKHQRIHTGE 304

  Fly   273 TDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEH 337
            ..::|..|:|.|..:.||..|.:.|..::.:||  |.|::.|....||..|...|||   .|...
Mouse   305 KPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKC--SECDKCFTQPSHLSIHRRIHSG---EKPYK 364

  Fly   338 CGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANC----TEVFASYAEKRIHMLER----------- 387
            |..|.|.|....|||.| .|.|.|||||||:.|    ||.|.....:|||..|:           
Mouse   365 CSECDKCFTDKCTLRKH-QRIHTGEKPYKCSECDKCFTEKFTLRKHQRIHTGEKPYKCNECDKCF 428

  Fly   388 --------HRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRP------------GAPIIAN 432
                    |:...|..:..:|..|.:.|:....|..|......::|            .:|:..:
Mouse   429 TDKGSLRVHQRIHTGEKPYKCSECDKCFTKPSHLSIHRRIHSGEKPYKCSECDKCFTQPSPLSIH 493

  Fly   433 NK-----------------------RVLQQKR--ERQYSGLFQCGSCSQRFNMKSALERHAAVHS 472
            .:                       ||.|:..  |:.|    :|..|.:.|...|.|..|..:||
Mouse   494 RRIHSGEKPYKCSECDKCFTDKGSLRVHQRIHIGEKPY----KCSECDKCFTQPSHLSIHCRIHS 554

  Fly   473 EKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKC 537
             .::|:.|..|.|.|.....::.|.:.|..|||..|..|.|.|..|..|.:|:..| ..||.:||
Mouse   555 -GEKPYKCSECDKCFTHKGSLRVHHRIHAGEKPYKCSECDKCFTEKNGLRRHQRIH-TGEKPYKC 617

  Fly   538 NVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQPLDDLI 602
            :.|.:.:..:..|.:|||.|||:..|||..|.:.|.....|..| ||.|:.....:|....:.|:
Mouse   618 SECDKCFTRKSHLSIHQRIHTGEKLYKCSECDKCFTQQCHLSIH-QKIHSGENLTNAMNATNALV 681

  Fly   603  602
            Mouse   682  681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..88 CDD:462262
COG5048 198..>508 CDD:227381 102/390 (26%)
C2H2 Zn finger 221..241 CDD:275368 6/19 (32%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 7/20 (35%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
SUF4-like 536..>586 CDD:411020 19/49 (39%)
C2H2 Zn finger 537..558 CDD:411020 6/20 (30%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..586 CDD:411020 7/20 (35%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Rex2NP_001171238.1 KRAB 27..67 CDD:460171
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 229..245 CDD:275368 1/15 (7%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 277..666 CDD:227381 115/401 (29%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..357 CDD:275368 7/21 (33%)
C2H2 Zn finger 365..385 CDD:275368 9/20 (45%)
C2H2 Zn finger 393..413 CDD:275368 6/19 (32%)
C2H2 Zn finger 421..441 CDD:275368 1/19 (5%)
C2H2 Zn finger 449..469 CDD:275368 5/19 (26%)
C2H2 Zn finger 477..497 CDD:275368 1/19 (5%)
C2H2 Zn finger 505..525 CDD:275368 3/19 (16%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
C2H2 Zn finger 561..581 CDD:275368 5/19 (26%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
C2H2 Zn finger 617..637 CDD:275368 6/19 (32%)
C2H2 Zn finger 645..665 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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