DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and 4930522L14Rik

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_011247924.1 Gene:4930522L14Rik / 100041734 MGIID:1925270 Length:666 Species:Mus musculus


Alignment Length:382 Identity:116/382 - (30%)
Similarity:177/382 - (46%) Gaps:37/382 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFE 276
            :|..|:||.|.:|...|.......:|.:....||.:.|..|||.:..:|..:.|...:..|..:|
Mouse   321 AHTGEKPYECKQCGKAFACQNYYQIHKRIHTGEKPYECKQCGKAFAYQHYYQIHKRIHTGEKPYE 385

  Fly   277 CALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFC 341
            |..|.|.|..:.....|.:.|..::.::|:.  |.:.|.|:|.|..||.||||   .|...|..|
Mouse   386 CKQCGKAFAYQNQYQVHKRIHTGEKPYECKQ--CSKSFASRRQLRIHERTHSG---EKPYECNQC 445

  Fly   342 GKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQP 406
            ||||.....||.| .|.|.|||||||..|.:.|:.....::|.:..|.|...    .:|..|.:.
Mouse   446 GKTFAFRGQLRKH-ERIHTGEKPYKCDECGKAFSLQGNLKMHKITTHTEETP----YKCDQCGKA 505

  Fly   407 FSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVH 471
            |:     .|.|...|                  ||.......:.|..||:.|..:..|.:|..:|
Mouse   506 FA-----YHSMFQVH------------------KRTHTGEKPYDCKQCSKSFASRGQLRKHERIH 547

  Fly   472 SEKDRPHACPHCSKRFKRAQDMKWH-IKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNF 535
            : .::|:.|..|.|.|....::|.| |.||.:|.|..||.|||.||...:...|:.:| ..||.:
Mouse   548 T-GEKPYKCDQCGKAFAHHSNLKVHKITTHTEETPYKCDQCGKVFAYHSIFQVHKRTH-TREKPY 610

  Fly   536 KCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPH 592
            :|..||:|:..:...::|:|||||:..|:|..|.:.|.:|.:|:.| ::.|...:.:
Mouse   611 ECKQCGKAFSCQNYYQVHKRTHTGEKPYECKQCSKSFASHGQLRKH-ERIHTGEKSY 666

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 87/296 (29%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 5/19 (26%)
C2H2 Zn finger 305..327 CDD:275368 8/21 (38%)
C2H2 Zn finger 338..359 CDD:275368 10/20 (50%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 7/20 (35%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..582 CDD:275368 5/16 (31%)
4930522L14RikXP_011247924.1 KRAB 4..44 CDD:366587
C2H2 Zn finger 79..97 CDD:275368
COG5048 <86..226 CDD:227381
C2H2 Zn finger 105..125 CDD:275368
C2H2 Zn finger 133..153 CDD:275368
C2H2 Zn finger 161..181 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
COG5048 213..624 CDD:227381 102/337 (30%)
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
C2H2 Zn finger 273..289 CDD:275368