DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zkscan16

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001092793.1 Gene:Zkscan16 / 100041581 MGIID:3510405 Length:728 Species:Mus musculus


Alignment Length:488 Identity:115/488 - (23%)
Similarity:188/488 - (38%) Gaps:76/488 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 EAQLKLSHIYDKIDASSLEDDEIGQEDLEPAEEHQETETTKPT-----TTVSAETQPNNTASDPI 141
            :.:.:..|...|.|.......|..:.:.|.....:..:.|..|     .::|..:|.:.....|.
Mouse   279 KTEFQRRHGKPKKDHGKRSSHENRESETEGTSSGKRVKQTSDTLKHRKASLSKMSQRSKEGKKPF 343

  Fly   142 EIFVDAVDIDEAEEEEEEEEQQQQYDEEVEEPITDESAPPQ---LTISYACKFCLRPQENYQLQQ 203
            ......|:..|...|:..:..:.:.|........:....|:   |:.:..|..|     .....|
Mouse   344 SFHSALVNRRELRREKSRKCGEPEKDPRRHLSPAERKRHPKIGSLSKTETCSKC-----GVAFTQ 403

  Fly   204 LLLEHINASHDPEQPYNCPECEAR-FQDAASRTVHLKSSHVEKQHACGVCGKKY--GDRHNL--- 262
            :|...|.:|       .|.:|... |||.|..  ..|....|:...||.|||.:  |.:.::   
Mouse   404 ILENCIESS-------QCEKCRKNLFQDEAPN--QDKEPDPEEASKCGKCGKAFEPGTKRSVCLE 459

  Fly   263 -----------RHHVEKYHSETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFIS 316
                       :.|.:....|..::|..|.|||.....|.:|.:.|..::.:.|:|  |.|.|..
Mouse   460 CRKAPKASASPKPHNKADRKEKRYKCDECGKRFAELYFLTHHQRTHTGEKPYVCKH--CGRPFSD 522

  Fly   317 QRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKR 381
            ......|:..|:|   .|...|..|||:|.|..:|..| .|.|.|||||||..|.:.|     ::
Mouse   523 YSSFYQHQRIHTG---EKPYTCKECGKSFTHSSSLSKH-QRIHTGEKPYKCNECGKAF-----RQ 578

  Fly   382 IHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYS 446
            ...|.||::..|..:...|..|...|.....:::|......::|                     
Mouse   579 NSCLTRHQKIHTGEKPFLCKDCGLSFRLFSSIMYHQRLHAGEKP--------------------- 622

  Fly   447 GLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVC 511
              ::|..|.:.|...|.|.||...|:.. :|:.|..|.|.|:::..:..||:||..|||..||.|
Mouse   623 --YKCTHCEKGFPSHSRLSRHLRCHTGA-KPYKCKECGKTFRQSSSLNLHIRTHTGEKPYKCDYC 684

  Fly   512 GKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAY 544
            |.||....:|.:|..:|..::  ::|..||:.:
Mouse   685 GAAFTRSTILIEHVKTHTNVQ--YECKKCGKTF 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 0/4 (0%)
COG5048 198..>508 CDD:227381 85/326 (26%)
C2H2 Zn finger 221..241 CDD:275368 7/20 (35%)
C2H2 Zn finger 249..269 CDD:275368 7/35 (20%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 3/8 (38%)
C2H2 Zn finger 565..582 CDD:275368
Zkscan16NP_001092793.1 SCAN 45..132 CDD:366881
KRAB 170..223 CDD:214630
PRK07219 <383..489 CDD:235971 25/119 (21%)
C2H2 Zn finger 457..477 CDD:275368 1/19 (5%)
COG5048 <462..608 CDD:227381 45/156 (29%)
C2H2 Zn finger 485..505 CDD:275368 7/19 (37%)
C2H2 Zn finger 513..533 CDD:275368 6/21 (29%)
COG5048 <537..725 CDD:227381 61/211 (29%)
C2H2 Zn finger 541..561 CDD:275368 9/20 (45%)
C2H2 Zn finger 569..589 CDD:275368 6/24 (25%)
C2H2 Zn finger 597..617 CDD:275368 4/19 (21%)
C2H2 Zn finger 625..645 CDD:275368 7/19 (37%)
C2H2 Zn finger 653..673 CDD:275368 6/19 (32%)
C2H2 Zn finger 681..701 CDD:275368 8/19 (42%)
C2H2 Zn finger 708..725 CDD:275368 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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