Protein Alignment Son and RTL1

DIOPT Version :10

• Sequence 1: NP_649914.1
• Gene: Son / 41159
• FlyBaseID: FBgn0037716
• Length: 874
• Species: Drosophila melanogaster
• Sequence 2: NP_178180.1
• Gene: RTL1 / 844404
• AraportID: AT1G80650
• Length: 198
• Species: Arabidopsis thaliana
• Alignment Length: 271
• Identity: 51/271 - (18%)
• Similarity: 85/271 - (31%)
• Gaps: 113/271 - (41%)

  Fly   599 IPSTSPVTPMQSASIFPDVTPPSMDVSSIITQRLSAIRRLQENPADSEALKMMYTAQRN-MSSWA 662
            |.|...:.|:..:|| |.:.|.:.|..::..||.            .|.....:..:.| :||::
plant    18 IISLKDIPPLDPSSI-PSMKPMAQDHHNVGMQRF------------QEKTDFKFEEEDNAISSFS 69

  Fly   663 NSKHLPGQFTGSTGAQVMKAHELNSGPQLWVRKDQMTSTKPVTGGMGMALLQKMGWKPGEGLGRC 727
            |.:..|                              .||:.:      :|.:|:..||.|.
plant    70 NIQIDP------------------------------NSTRSI------SLEKKLAPKPDEE---- 94

  Fly   728 KTGSLQPLLLDVKLDKRGLVSRDDLRPPQMRAPAAQRRNKNMAGPIGAGPCPAVQGAGPGPLAST 792
            .|.:.:|            :|:||             .:|...|...:
plant    95 HTTTTKP------------ISKDD-------------ESKTRRGSAKS----------------- 117

  Fly   793 PLVTQDKHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNRSFLFSVEI-----NGQTFTPDRGS-N 851
                       ||:|:.:..:|.||.|:.....||.|.|.|.:.|.:     :|:|.....|. .
plant   118 -----------VLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFGDPR 171

  Fly   852 NKKEAKLNAAA 862
            .||:|....||
plant   172 RKKKAAAEHAA 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Son	NP_649914.1	PHA03247	<455..627	CDD:223021	8/27 (30%)
		G-patch	705..747	CDD:396249	7/41 (17%)
		DSRM_SON-like	798..872	CDD:380699	21/71 (30%)
RTL1	NP_178180.1	DSRM_DCL_plant	120..191	CDD:380698	19/63 (30%)