DRSC/TRiP Functional Genomics Resources

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Protein Alignment Son and l(3)psg2

DIOPT Version :9

Sequence 1:NP_001262426.1 Gene:Son / 41159 FlyBaseID:FBgn0037716 Length:874 Species:Drosophila melanogaster
Sequence 2:NP_647974.1 Gene:l(3)psg2 / 38630 FlyBaseID:FBgn0035617 Length:1929 Species:Drosophila melanogaster


Alignment Length:1078 Identity:209/1078 - (19%)
Similarity:341/1078 - (31%) Gaps:341/1078 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GASVETPQVA-GSQTNPPVQ---------EPLALTKIP------PIKVKSERPDAEVEAKLRAMN 56
            |::|...|.| |.|..||..         ||..:...|      |...|....:..:...||   
  Fly     7 GSAVGMEQPATGKQLKPPEDLQDNDTNSLEPGEVVTPPHYHPSSPAVKKHLSKELMISKTLR--- 68

  Fly    57 AKIKAEMVTLMRRSNSN--------ELGNNDESGESESSASADDKKNIKPVK------------- 100
             |:...:|...|:.|.:        |..::.|...|||.:|.:|.||::.|:             
  Fly    69 -KLPVSVVEQARKENGSGGTPNAQAEDADDSEGLYSESDSSGEDLKNVEDVQKARKEKQEEAAAA 132

  Fly   101 -----------------------------------------------------SSNEILAELFG- 111
                                                                 ::|.:.|.:.| 
  Fly   133 TLPQAPPTPFLGINPLRFHMRAPCFEFPRMGFMPRMNRGGPRGMRPTFFGRPPAANRMGAPMMGG 197

  Fly   112 -----------------------------------VFNAAPPEELLDDNLFKKKKKVKKEKKDKK 141
                                               ::.|..|......||..:....|.|....|
  Fly   198 LPTQGPPPGAYAPQNPPPTGINSNSGRCKRLQSDVIWTALQPPVSFVFNLVSECSNTKHENCRTK 262

  Fly   142 AK----KKKTTKSDGECSDSEAEGKHKHKRKKHKHKD-IRVKDKEKDRDRDKSKEKDRDR----- 196
            |:    ..|.:|...|...:|...::...|:..:||: :|.|...:..||.:::.:.|:|     
  Fly   263 AETTDHNSKESKLPSETKSTEPLIENNRSRELPQHKNYVRGKTSNRSHDRTQNRGRTRERSKESH 327

  Fly   197 --VTDKSKEKD------RDRD----RDRDKSKDKFTAAQAPSEKEKEKSESRKRSAVEPSSHSEK 249
              .|:.||.||      |:||    :.|::|:||...........|||.|.........|..|::
  Fly   328 GKSTENSKNKDEGRGKGRERDLFRRKSRERSQDKNLNRAKSMNLSKEKDEVGGEPRNTASGKSQE 392

  Fly   250 RER-----HEREKHRDWEREREREKEHERERVRSNNSFYNGQREADRLKGSESASTKSRQEQDLS 309
            |::     .:|.:.||..|.:.|||...|::.||..:    ..|..|.|..:.:|::.:: ::.|
  Fly   393 RDQSRGKTKDRSRERDRTRNKTREKSQARDQTRSKAN----DAEHTRAKSRKRSSSRDKR-REKS 452

  Fly   310 DISLSDEESYLREKASNGRRRAHNSFYDEKEELSVSPKRNVRESNTRRNRKSRSRSRDLGIDKKR 374
            ...|.|:|.  .|..|..:....::.:.||...|....::..|.|.  |:|.|.||:|....|:|
  Fly   453 KEKLGDKEK--NEDLSKEKLEGKSTEHSEKRNESKVKNKDTNEENA--NKKLRERSKDRNHSKER 513

  Fly   375 LLEIARRNAINMFKQGTMPGVANMTAEVKDKVLVKMRYGGRTIQDLTDFCKKISNGDGLSDLSSE 439
            |.|..:                |.:.|.|.:                  .||:.|.     :.:.
  Fly   514 LHERTQ----------------NKSEERKPE------------------AKKVRNA-----IENS 539

  Fly   440 EESDVDKNGNAKVFHHPFQLKEREPIVMHIRNSTALVPAPPRLDEQTKAITMQFPVSSGQTHRNN 504
            :|:..|:                       :....|.|...:.||::|         ..|..|:.
  Fly   540 KEAPTDR-----------------------KKDKLLGPLGEKTDERSK---------DKQIKRSR 572

  Fly   505 EVWVPVDPKDS-LVPLPSLPPAKQATNMFKET--PKNVFAKSIPLQE----QQEPAFKPLGGAVV 562
            |..|...||:| ...|...||.:...:..|.:  |...|::|...:|    ::.....|.|....
  Fly   573 EQSVTKCPKESGKDTLMEHPPQENGLDGSKRSSMPHESFSESAKTREHASRRKNQTLSPWGSREG 637

  Fly   563 VPPLA--ATQLPTVP-------------QSVPP-----------TVPKEFAPPAVPFVPEVPIPS 601
            .||:.  ..|:|..|             ...||           |:.:...||....:|.|||..
  Fly   638 TPPMTPPQVQIPQTPIVDIANPKDFDIFADSPPRVNTAVSAPAATIERSTTPPLKSSIPIVPIAK 702

  Fly   602 TSPVTPMQSAS-----IFPDVTPPSMDVSSIITQRLSAIRRLQENPADSEA---LKMMY--TAQR 656
            ...:.|:..||     |...:....:.:.:::..:....||..|.....||   :|..|  .::.
  Fly   703 ADKLAPLLKASEIHSRIGALLEESDLHLDNLLATKEQLFRRTNEYKERKEAPKEIKAEYLPNSRH 767

  Fly   657 NMSSWANS-----KHLPGQFTGSTGAQVMKAHELNSGPQLWVRKDQMTSTKPVTGGMGMALLQKM 716
            |.|:...:     |..|..........|:...:.:|.|....|:.|...::.......:.|.:..
  Fly   768 NRSATGRAEVEHHKSQPRHINPFKRESVLSGRKSSSRPSSKERRFQRHDSEVENWDRDLELERNQ 832

  Fly   717 GWKPGEGLGRCKTGSLQPLLLDVKLDKRGLVSRDDLRPPQM-----RAPAAQRRNKNMAGPIGAG 776
                   |...:....||...| :..|..:....||.||.:     |......||          
  Fly   833 -------LNGSQLTGFQPRKSD-EYTKFSIKKEKDLTPPPLQTNFTRTTIKIERN---------- 879

  Fly   777 PCPAVQGAGPGPLASTPLVTQDKHPVCVLNELTSKNKWMPPQYKLRQD------IGPAHNRSFLF 835
                          :|| ....:|.|.|.|...:.|  .||..|.::.      |....|...|.
  Fly   880 --------------ATP-PRHMEHDVLVRNGAVATN--APPPAKEQESPDTDDYIDNWENDDSLA 927

  Fly   836 SVEINGQTFTPDRGSNNKKEAKLNAAALCLRSLGILPP 873
            |:..|....||....|  ..|.|||..        |||
  Fly   928 SMPKNAPPVTPTPAPN--ANASLNATP--------LPP 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SonNP_001262426.1 PHA03247 <455..627 CDD:223021 40/209 (19%)
G-patch 705..747 CDD:396249 6/41 (15%)
DSRM_SON-like 798..872 CDD:380699 20/79 (25%)
l(3)psg2NP_647974.1 PRP38_assoc 374..450 CDD:289628 20/80 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BZCQ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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