DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Son and son

DIOPT Version :10

Sequence 1:NP_649914.1 Gene:Son / 41159 FlyBaseID:FBgn0037716 Length:874 Species:Drosophila melanogaster
Sequence 2:XP_012813456.2 Gene:son / 100036715 XenbaseID:XB-GENE-6037418 Length:5561 Species:Xenopus tropicalis


Alignment Length:1081 Identity:273/1081 - (25%)
Similarity:408/1081 - (37%) Gaps:371/1081 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TEKGASVETPQVAGSQTNPPVQEPLALTKIPPIKVKSERPDAEVE-AKLRAMNAKIK-------- 60
            ||..:|.|: ||:.......:....|.:.:|.:|..:..|:|..: ::.|::..:.|        
 Frog  4621 TELSSSTES-QVSEVTMAGKLIATSAQSAVPALKESALLPEATCKRSRSRSVTKRTKSRSKSISR 4684

  Fly    61 -----AEMVTLMRRSNSNELGNNDESGESESSASADDKKNI-KPVKSSNEILAELFGVFNAAPPE 119
                 ::.||.|:||.|..........:|.:|......|:: |..:|.::.:.:           
 Frog  4685 SRDSRSKSVTRMKRSRSKSGTRKRSRSKSATSWKRSRSKSVAKRQRSQSKTVMQ----------- 4738

  Fly   120 ELLDDNLFKKKKKVKKEKKDKK-------------AKKKKTTKSD--GECSDSEAEGKHKHKRKK 169
                 ....:.|.|.:..:.|.             .:|:..:|||  ...|.|.:.|:.:..|.:
 Frog  4739 -----GKRSRSKSVTRRSRSKSYLQRRRSWSKSTTRRKRSQSKSDTGKRRSRSRSVGRKRRSRSR 4798

  Fly   170 HKHKDIRVKDKEKDRDR-DKSKEKDRDRVTDKSKEKDRDRDRDRDKSKDKFTAAQAPSEKEKEKS 233
            ...:..|.:.|...|.| .:||...|.| ..:||...| ::|.|.||..:...:::||...:::|
 Frog  4799 SVGRKRRSRSKSPVRKRHSRSKSAGRKR-RSRSKSAGR-KNRSRSKSVGRKRRSRSPSTSRRKRS 4861

  Fly   234 ES--RKRSAVEPSSHSEKRERHEREKHRDWER--------EREREKEHERERVRSNNSFYNGQRE 288
            .|  |:||    ||.|..|.|..|.......|        .|.|.:.....|.|.:.|...|.|.
 Frog  4862 RSVRRRRS----SSASVARRRRSRSTSVARRRRSRSTSVVRRRRSRSSSVARRRRSRSVSAGPRR 4922

  Fly   289 AD----------------------------------------------------RLKGSESASTK 301
            :.                                                    |..||.|.:.|
 Frog  4923 SSRSVSVPRKRRSCSPSVSRRRRTRSPSVSRRRRSRTPSVSRRRRSRSPSVGRRRRSGSTSVTRK 4987

  Fly   302 SRQEQDL-------------------------------------------SDISLSDE------E 317
            .|.....                                           |.:|.||.      .
 Frog  4988 GRSRSGSLAHRRRSRSASEACTKRSRSVSATRKKRSVSKSLTPKSPTYKPSAVSRSDRSRSHSAS 5052

  Fly   318 SYLRE-------------KASNGRRRAHNSFYDEKEELSVSPKRNVRESNTRRN----------- 358
            :.||:             |.|..|||..||    |:..:|..:|..|....|:.           
 Frog  5053 NVLRKRKTRSRSSSRDKNKLSEKRRRRSNS----KDHYNVKSRRRSRTPPRRKKSRSPIKRMSPV 5113

  Fly   359 -------------------RKSRSRSRD------------LGIDKKRLLEIARRNAINM-FKQGT 391
                               |:.||||||            ..:||.:|||||:.||..| .|.|.
 Frog  5114 RRRRSRSAIRRKSFSRSPVRRKRSRSRDKSLDSSRSPKRLTDLDKAQLLEIAKANAAAMCAKAGV 5178

  Fly   392 ------MPGVANMTAEVKDKVLVKMRYGGRTIQDLTDFCKKI--SNGDGLSDLSSEEESDVDKNG 448
                  .|.:|.:| .|::|  :.:|..|.|||:||:.||:|  |..|.:. ::...:||.::..
 Frog  5179 PLPPSLKPVIAPVT-PVEEK--ITLRSYGVTIQELTEKCKQIAQSKEDDVI-VNKPHDSDEEEEE 5239

  Fly   449 NAKVFHHPFQLKEREPIVMHIRNSTALVPAPPRLDEQTKAITMQFPVSSGQTHRNNEV------W 507
            ....::|||::.|.:||...:.| .::.|||    :....:|.:||||||..||..|.      |
 Frog  5240 ERPFYNHPFKVSEHKPISFSLLN-PSVKPAP----KNQVTLTKEFPVSSGSQHRKKEADKVYGEW 5299

  Fly   508 VPVDPKDSLVPLPSLPPAKQATNMFKETPKNVFAKSIPLQEQQEPAFKPLGGAVVVPPLAATQLP 572
            ||||.|.                  :|:..:||.                               
 Frog  5300 VPVDKKS------------------EESKDDVFT------------------------------- 5315

  Fly   573 TVPQSVPPTVPKEFAPPAVPFVPEVPIPSTSPVTPMQSASIFPDVTPPSMDVSSIITQRLSAIRR 637
                                        :|.|..|              :|::|.:.:|..|..|
 Frog  5316 ----------------------------NTGPSQP--------------VDITSAMNERALAQTR 5338

  Fly   638 LQENPADSEALKMMYTAQRNMSSWANSKHLPGQFTGSTGAQVMKAHEL-NSGPQLWVRKDQMTST 701
            |..||.|.|||.|:..||..:.:||.|..|||||||||||||:.|.|: |||||.|::|||....
 Frog  5339 LTGNPFDMEALIMLNRAQEQIDAWAQSTSLPGQFTGSTGAQVLSADEISNSGPQAWLKKDQFLKA 5403

  Fly   702 KPVTGGMGMALLQKMGWKPGEGLGRCKTGSLQPLLLDVKLDKRGLVSRDDLRPPQMRAPAAQRRN 766
            .|||||.|..|::|||||.|:||||...|::.|:|:|.|.|::|||:..:....::..|..    
 Frog  5404 APVTGGRGALLMRKMGWKEGKGLGRHNEGNVDPILIDFKTDRKGLVADGEKASNKLALPMM---- 5464

  Fly   767 KNMAGPIGAGPCPAVQGAGPGPLASTPLVTQDKHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNR 831
            |:::|                           |||:..|.||.:|.||.||::.|..|.||.|.:
 Frog  5465 KDLSG---------------------------KHPISALMELCNKKKWSPPEFVLVDDTGPEHRK 5502

  Fly   832 SFLFSVEINGQTFTPDRGSNNKKEAKLNAAALCLRSLGILP 872
            .|||.|.:||..:.|::.|.|||.||..|||..|::||.||
 Frog  5503 RFLFRVTVNGGVYQPNQPSVNKKLAKATAAAAALQALGALP 5543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SonNP_649914.1 PHA03247 <455..627 CDD:223021 33/177 (19%)
G-patch 705..747 CDD:396249 22/41 (54%)
DSRM_SON-like 798..872 CDD:380699 35/73 (48%)
sonXP_012813456.2 RSRP 2193..>2346 CDD:293674
RSRP 4691..>4777 CDD:293674 15/101 (15%)
G-patch 5407..5451 CDD:396249 24/43 (56%)
DSRM_SF 5469..>5523 CDD:444671 25/80 (31%)
Blue background indicates that the domain is not in the aligned region.

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