DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kap-alpha3 and SPAG6

DIOPT Version :9

Sequence 1:NP_001163572.1 Gene:Kap-alpha3 / 41158 FlyBaseID:FBgn0027338 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_036575.1 Gene:SPAG6 / 9576 HGNCID:11215 Length:509 Species:Homo sapiens


Alignment Length:460 Identity:98/460 - (21%)
Similarity:163/460 - (35%) Gaps:114/460 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VPNLDSNTDEEEQLSSSIDLKKLAKAAADATKPEQQLAAVQAARKLLSSDKNPPINDLIQSDILP 112
            |..|.:.....|.|.::..:..|.....|.....||.||:...|  |::..:.....:::.||||
Human    24 VAELATRPQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGR--LANYNDDLAEAVVKCDILP 86

  Fly   113 ILVECLKQHN----------------HT-------------------MLQFE------AAWALTN 136
            .||..|.:.|                |:                   :..|:      |||||..
Human    87 QLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDTLVICLEDFDPGVKEAAAWALRY 151

  Fly   137 IASGTSAQTNEVVAAGAVPLFLQLLNSPAPNVCEQAVWALGNIIGDGPLLRDFVIKHGVVQPLLS 201
            ||...:..:..||.||||||.:..:..|...:...|..||.:|....|.|...|:..|.|..|..
Human   152 IARHNAELSQAVVDAGAVPLLVLCIQEPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQ 216

  Fly   202 FI-KPDIPITFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLIHHTDTNILVDTVWAISYLT 265
            .| .||..:.                         |:||.||:.:..|:                
Human   217 MILNPDAKLK-------------------------HQILSALSQVSKHS---------------- 240

  Fly   266 DGGNDQIQMVIESGVVPKLIPLLGNSEVKVQTAALRAVGNIVTGSDEQTQVVLNYDALSYFPGLL 330
               .|..:||:|:.:.|.::..|.:.:..|:..|...:..|...:.|.:|:|:|...::.....:
Human   241 ---VDLAEMVVEAEIFPVVLTCLKDKDEYVKKNASTLIREIAKHTPELSQLVVNAGGVAAVIDCI 302

  Fly   331 SHPKEKIRKEAVWFLSNITAGNQSQVQAVINVGLLPKIIENLS-KGEFQTQKEAAWAISNLTISG 394
            ...|...|...:..|..:.|.:::...|||....:|::...|| :.|...:..||||:..:   |
Human   303 GSCKGNTRLPGIMMLGYVAAHSENLAMAVIISKGVPQLSVCLSEEPEDHIKAAAAWALGQI---G 364

  Fly   395 NR--EQVFTLIKEGVIPPFCDLL----SCQDTQVINVVLDGLNNMLKVADSHVEAVANCIEECEG 453
            ..  |....:.....:|....|.    |.:|.||                ...:|:.|.:::|..
Human   365 RHTPEHARAVAVTNTLPVLLSLYMSTESSEDLQV----------------KSKKAIKNILQKCTY 413

  Fly   454 LAKIE 458
            |..:|
Human   414 LPALE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha3NP_001163572.1 IBB 7..88 CDD:280005 10/39 (26%)
SRP1 8..500 CDD:227396 98/460 (21%)
ARM 104..224 CDD:237987 39/161 (24%)
armadillo repeat 104..137 CDD:293788 15/73 (21%)
armadillo repeat 145..181 CDD:293788 13/35 (37%)
armadillo repeat 187..222 CDD:293788 7/35 (20%)
ARM 236..350 CDD:237987 22/113 (19%)
armadillo repeat 239..264 CDD:293788 4/24 (17%)
armadillo repeat 272..308 CDD:293788 8/35 (23%)
armadillo repeat 314..348 CDD:293788 6/33 (18%)
ARM 315..433 CDD:237987 26/124 (21%)
armadillo repeat 356..390 CDD:293788 11/34 (32%)
armadillo repeat 399..433 CDD:293788 6/37 (16%)
Arm_3 442..485 CDD:292804 5/17 (29%)
SPAG6NP_036575.1 ARM 1 31..70 10/40 (25%)
armadillo repeat 37..68 CDD:293788 8/32 (25%)
ARM 2 73..112 8/38 (21%)
armadillo repeat 78..110 CDD:293788 8/31 (26%)
SRP1 112..>423 CDD:227396 78/370 (21%)
ARM 3 115..154 7/38 (18%)
armadillo repeat 120..152 CDD:293788 6/31 (19%)
ARM 4 157..196 13/38 (34%)
armadillo repeat 160..196 CDD:293788 13/35 (37%)
ARM 5 199..238 14/63 (22%)
armadillo repeat 202..234 CDD:293788 11/56 (20%)
ARM 6 241..280 9/38 (24%)
armadillo repeat 244..278 CDD:293788 7/33 (21%)
HEAT repeat 289..325 CDD:293787 6/35 (17%)
ARM 7 325..365 11/42 (26%)
HEAT repeat 335..369 CDD:293787 9/36 (25%)
ARM 8 368..409 9/56 (16%)
HEAT repeat 378..406 CDD:293787 7/43 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.