Protein Alignment Kap-alpha3 and IMPA-8

DIOPT Version :10

• Sequence 1: NP_731377.1
• Gene: Kap-alpha3 / 41158
• FlyBaseID: FBgn0027338
• Length: 514
• Species: Drosophila melanogaster
• Sequence 2: NP_200013.1
• Gene: IMPA-8 / 835275
• AraportID: AT5G52000
• Length: 441
• Species: Arabidopsis thaliana
• Alignment Length: 417
• Identity: 162/417 - (38%)
• Similarity: 236/417 - (56%)
• Gaps: 18/417 - (4%)

  Fly    80 PEQQLAAVQAARKLLSSDKNPPINDLIQSDILPILVECLKQHNHTMLQFEAAWALTNIASGTSAQ 144
            |..||.:|...|::.|   ...|:.:|:|.::|.||:.||......||:|.||||||||..   .
plant    23 PPLQLESVTKIRRITS---QRDISCVIRSGVVPRLVQLLKNQVFPKLQYEVAWALTNIAVD---N 81

  Fly   145 TNEVVAAGAVPLFLQLLNSPAPNVCEQAVWALGNIIGDGPLLRDFVIKHGVVQPLLSFIKPDIPI 209
            ...||...|||:.:||:.||...|.|||:|.|.|:.|.....||||:..||:.|||..:..|
plant    82 PGVVVNNNAVPVLIQLIASPKDYVREQAIWTLSNVAGHSIHYRDFVLNSGVLMPLLRLLYKD--- 143

  Fly   210 TFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLIHHTDTNILVDTVWAISYLTDGGNDQIQM 274
            |.||..||.:.||||.| |.|....:...||||.:|:|..|.::|.:...|:.:|::|..|.||.
plant   144 TTLRIATWALRNLCRGK-PHPAFDQVKPALPALEILLHSHDEDVLKNACMALCHLSEGSEDGIQS 207

  Fly   275 VIESGVVPKLIPLLGNSEVKVQTAALRAVGNIVTGSDEQTQVVLNYDALSYFPGLLSHPKE-KIR 338
            |||:|.||||:.:|......|...||..:|.:..|:.:|||.|:|..||.....:|:...| ||:
plant   208 VIEAGFVPKLVQILQLPSPVVLVPALLTIGAMTAGNHQQTQCVINSGALPIISNMLTRNHENKIK 272

  Fly   339 KEAVWFLSNITAGNQSQVQAVINVGLLPKIIENLSKGEFQTQKEAAWAISNLTISGNREQVFTLI 403
            |.|.|.:||||||.:.|:|:||:..|:|.::......:|..:|||.|||||:.::|:.:|:..:.
plant   273 KCACWVISNITAGTKEQIQSVIDANLIPILVNLAQDTDFYMKKEAVWAISNMALNGSHDQIKYMA 337

  Fly   404 KEGVIPPFCDLLSCQDTQ-VINVVLDGLNNMLKVADSH-----VEAVANCIEECEGLAKIERLQS 462
            ::..|...||:|...|.: .|...||||.||||..::.     |......||:.|||.||.:||.
plant   338 EQSCIKQLCDILVYSDERTTILKCLDGLENMLKAGEAEKNSEDVNPYCLLIEDAEGLEKISKLQM 402

  Fly   463 HENVEIYKLAYEI-IDQYFTDEGEQTN 488
            ::|.:||:.||:| :..:|.::.|..|
plant   403 NKNDDIYEKAYKILVTNWFEEDDENNN 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Kap-alpha3	NP_731377.1	SRP1	8..500	CDD:227396	162/417 (39%)
		armadillo repeat	104..137	CDD:293788	15/32 (47%)
		armadillo repeat	145..181	CDD:293788	16/35 (46%)
		armadillo repeat	187..222	CDD:293788	15/34 (44%)
		armadillo repeat	239..264	CDD:293788	9/24 (38%)
		armadillo repeat	272..308	CDD:293788	15/35 (43%)
		armadillo repeat	314..348	CDD:293788	14/34 (41%)
		armadillo repeat	356..390	CDD:293788	13/33 (39%)
		armadillo repeat	399..433	CDD:293788	10/34 (29%)
IMPA-8	NP_200013.1	SRP1	13..418	CDD:227396	159/404 (39%)
		armadillo repeat	44..77	CDD:293788	15/32 (47%)
		armadillo repeat	85..118	CDD:293788	16/32 (50%)
		armadillo repeat	124..156	CDD:293788	15/34 (44%)
		armadillo repeat	172..197	CDD:293788	9/24 (38%)
		armadillo repeat	205..241	CDD:293788	15/35 (43%)
		armadillo repeat	247..282	CDD:293788	14/34 (41%)
		armadillo repeat	290..324	CDD:293788	13/33 (39%)
		armadillo repeat	333..368	CDD:293788	10/34 (29%)