DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha3 and IMPA-8

DIOPT Version :9

Sequence 1:NP_001163572.1 Gene:Kap-alpha3 / 41158 FlyBaseID:FBgn0027338 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_200013.1 Gene:IMPA-8 / 835275 AraportID:AT5G52000 Length:441 Species:Arabidopsis thaliana


Alignment Length:417 Identity:162/417 - (38%)
Similarity:236/417 - (56%) Gaps:18/417 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PEQQLAAVQAARKLLSSDKNPPINDLIQSDILPILVECLKQHNHTMLQFEAAWALTNIASGTSAQ 144
            |..||.:|...|::.|   ...|:.:|:|.::|.||:.||......||:|.||||||||..   .
plant    23 PPLQLESVTKIRRITS---QRDISCVIRSGVVPRLVQLLKNQVFPKLQYEVAWALTNIAVD---N 81

  Fly   145 TNEVVAAGAVPLFLQLLNSPAPNVCEQAVWALGNIIGDGPLLRDFVIKHGVVQPLLSFIKPDIPI 209
            ...||...|||:.:||:.||...|.|||:|.|.|:.|.....||||:..||:.|||..:..|   
plant    82 PGVVVNNNAVPVLIQLIASPKDYVREQAIWTLSNVAGHSIHYRDFVLNSGVLMPLLRLLYKD--- 143

  Fly   210 TFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLIHHTDTNILVDTVWAISYLTDGGNDQIQM 274
            |.||..||.:.||||.| |.|....:...||||.:|:|..|.::|.:...|:.:|::|..|.||.
plant   144 TTLRIATWALRNLCRGK-PHPAFDQVKPALPALEILLHSHDEDVLKNACMALCHLSEGSEDGIQS 207

  Fly   275 VIESGVVPKLIPLLGNSEVKVQTAALRAVGNIVTGSDEQTQVVLNYDALSYFPGLLSHPKE-KIR 338
            |||:|.||||:.:|......|...||..:|.:..|:.:|||.|:|..||.....:|:...| ||:
plant   208 VIEAGFVPKLVQILQLPSPVVLVPALLTIGAMTAGNHQQTQCVINSGALPIISNMLTRNHENKIK 272

  Fly   339 KEAVWFLSNITAGNQSQVQAVINVGLLPKIIENLSKGEFQTQKEAAWAISNLTISGNREQVFTLI 403
            |.|.|.:||||||.:.|:|:||:..|:|.::......:|..:|||.|||||:.::|:.:|:..:.
plant   273 KCACWVISNITAGTKEQIQSVIDANLIPILVNLAQDTDFYMKKEAVWAISNMALNGSHDQIKYMA 337

  Fly   404 KEGVIPPFCDLLSCQDTQ-VINVVLDGLNNMLKVADSH-----VEAVANCIEECEGLAKIERLQS 462
            ::..|...||:|...|.: .|...||||.||||..::.     |......||:.|||.||.:||.
plant   338 EQSCIKQLCDILVYSDERTTILKCLDGLENMLKAGEAEKNSEDVNPYCLLIEDAEGLEKISKLQM 402

  Fly   463 HENVEIYKLAYEI-IDQYFTDEGEQTN 488
            ::|.:||:.||:| :..:|.::.|..|
plant   403 NKNDDIYEKAYKILVTNWFEEDDENNN 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha3NP_001163572.1 IBB 7..88 CDD:280005 3/7 (43%)
SRP1 8..500 CDD:227396 162/417 (39%)
ARM 104..224 CDD:237987 52/119 (44%)
armadillo repeat 104..137 CDD:293788 15/32 (47%)
armadillo repeat 145..181 CDD:293788 16/35 (46%)
armadillo repeat 187..222 CDD:293788 15/34 (44%)
ARM 236..350 CDD:237987 45/114 (39%)
armadillo repeat 239..264 CDD:293788 9/24 (38%)
armadillo repeat 272..308 CDD:293788 15/35 (43%)
armadillo repeat 314..348 CDD:293788 14/34 (41%)
ARM 315..433 CDD:237987 45/119 (38%)
armadillo repeat 356..390 CDD:293788 13/33 (39%)
armadillo repeat 399..433 CDD:293788 10/34 (29%)
Arm_3 442..485 CDD:292804 16/43 (37%)
IMPA-8NP_200013.1 HEAT repeat 14..39 CDD:293787 6/18 (33%)
armadillo repeat 44..77 CDD:293788 15/32 (47%)
ARM 45..158 CDD:237987 52/118 (44%)
HEAT_2 51..156 CDD:290374 48/110 (44%)
armadillo repeat 85..118 CDD:293788 16/32 (50%)
armadillo repeat 124..156 CDD:293788 15/34 (44%)
ARM 171..284 CDD:237987 45/112 (40%)
armadillo repeat 172..197 CDD:293788 9/24 (38%)
armadillo repeat 205..241 CDD:293788 15/35 (43%)
armadillo repeat 247..282 CDD:293788 14/34 (41%)
ARM 250..368 CDD:237987 44/117 (38%)
armadillo repeat 290..324 CDD:293788 13/33 (39%)
armadillo repeat 333..368 CDD:293788 10/34 (29%)
Arm_3 382..>421 CDD:292804 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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