DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha3 and IMPA-9

DIOPT Version :9

Sequence 1:NP_001163572.1 Gene:Kap-alpha3 / 41158 FlyBaseID:FBgn0027338 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_195927.2 Gene:IMPA-9 / 831675 AraportID:AT5G03070 Length:519 Species:Arabidopsis thaliana


Alignment Length:523 Identity:138/523 - (26%)
Similarity:244/523 - (46%) Gaps:63/523 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRLQNFKNKGKDQDEMRRRRNEVTVELRKNKREETILKRRNVPNLDSNTDEEE------------ 59
            ||....|:...:....|||:..|||   ..:|.|.:::.:.:..:.:|.|.|:            
plant     9 NRRDPIKSSVGNVAGQRRRKQAVTV---AKERRELLVRAKRLCRVGTNGDVEDALVENEMMVDEE 70

  Fly    60 ------QLSSSIDLKKLAKAAADATKPEQQLAAVQAARKLLSSDKNPPINDLIQSDILPILVECL 118
                  |.|.|::..|.|.........::::.|::..|:|||..:.||:...:::..:|:||:||
plant    71 QPILEAQASKSVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPPVEAALRAGAIPLLVQCL 135

  Fly   119 KQHNHTMLQFEAAWALTNIASGTSAQTNEVVAAGAVPLFLQLL--NSPAPNVCEQAVWALGNIIG 181
            ...:......|:||.|||||:|...:|..::.  |:||.:..|  .|.|| |.||..||:||:.|
plant   136 SFGSPDEQLLESAWCLTNIAAGKPEETKALLP--ALPLLIAHLGEKSSAP-VAEQCAWAIGNVAG 197

  Fly   182 DGPLLRDFVIKHGVVQPLLSFIKPDIPITFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLI 246
            :|..||:.::..|.:.||...|.||...| :|...|.:.||.:..: :...|.:.:|...|:.::
plant   198 EGEDLRNVLLSQGALPPLARMIFPDKGST-VRTAAWALSNLIKGPE-SKAAAQLVKIDGILDAIL 260

  Fly   247 HH---TDTNILVDTVWAISYLTDGGNDQIQMVIESGVVPKLIPLLG-NSEVKVQTAALRAVGNIV 307
            .|   ||.....:..|.|.||:...:....|:::.|::..||..|. :|.:::....||::||.|
plant   261 RHLKKTDEETATEIAWIIVYLSALSDIATSMLLKGGILQLLIDRLATSSSLQLLIPVLRSLGNFV 325

  Fly   308 TGSDEQTQVVL------NYDALSYFPGLLSHPKEKIRKEAVWFLSNITAGNQSQVQAVINVGLLP 366
            ....:....:|      ....:......|......::|||.|.||||.||:....:.:.:..::|
plant   326 AVDPKAVLTILIREQNTEESIIGVLAKCLRSEHRVLKKEAAWVLSNIAAGSIEHKRMIHSTEVMP 390

  Fly   367 KIIENLSKGEFQTQKEAAWAISNLTI---SGNR------EQVFTLIKEGVIPPFCDLLSCQD--- 419
            .::..||...|..:||.|:.:.||.:   .|:|      |.:.:::..|.:..|.:|:...|   
plant   391 LLLRILSTSPFDIRKEVAYVLGNLCVESAEGDRKPRIIQEHLVSIVSGGCLRGFIELVRSPDIEA 455

  Fly   420 ----TQVINVVLDGLNNMLKVADSHVEAVANCIEECEGLAKIERLQSHENVEIYKLAYEIIDQYF 480
                .|.|.:||.|:.|         ......:|..:|:..:||.|.|||.|:..:|..::|:||
plant   456 ARLGLQFIELVLRGMPN---------GEGPKLVEGEDGIDAMERFQFHENEELRVMANSLVDKYF 511

  Fly   481 TDE 483
            .::
plant   512 GED 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha3NP_001163572.1 IBB 7..88 CDD:280005 20/98 (20%)
SRP1 8..500 CDD:227396 137/522 (26%)
ARM 104..224 CDD:237987 44/121 (36%)
armadillo repeat 104..137 CDD:293788 10/32 (31%)
armadillo repeat 145..181 CDD:293788 15/37 (41%)
armadillo repeat 187..222 CDD:293788 10/34 (29%)
ARM 236..350 CDD:237987 30/123 (24%)
armadillo repeat 239..264 CDD:293788 6/27 (22%)
armadillo repeat 272..308 CDD:293788 10/36 (28%)
armadillo repeat 314..348 CDD:293788 8/39 (21%)
ARM 315..433 CDD:237987 33/139 (24%)
armadillo repeat 356..390 CDD:293788 7/33 (21%)
armadillo repeat 399..433 CDD:293788 9/40 (23%)
Arm_3 442..485 CDD:292804 13/42 (31%)
IMPA-9NP_195927.2 SRP1 24..519 CDD:227396 135/508 (27%)
ARM 120..238 CDD:237987 43/121 (36%)
armadillo repeat 121..154 CDD:293788 10/32 (31%)
armadillo repeat 162..197 CDD:293788 15/37 (41%)
armadillo repeat 203..237 CDD:293788 10/34 (29%)
ARM 205..326 CDD:237987 31/122 (25%)
armadillo repeat 247..283 CDD:293788 10/35 (29%)
armadillo repeat 289..323 CDD:293788 8/33 (24%)
armadillo repeat 342..372 CDD:293788 7/29 (24%)
ARM 343..454 CDD:237987 27/110 (25%)
armadillo repeat 380..422 CDD:293788 9/41 (22%)
Arm_3 478..519 CDD:292804 13/37 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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