DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha3 and kpna2

DIOPT Version :9

Sequence 1:NP_001163572.1 Gene:Kap-alpha3 / 41158 FlyBaseID:FBgn0027338 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001002335.1 Gene:kpna2 / 436607 ZFINID:ZDB-GENE-040718-22 Length:525 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha3NP_001163572.1 IBB 7..88 CDD:280005
SRP1 8..500 CDD:227396
ARM 104..224 CDD:237987
armadillo repeat 104..137 CDD:293788
armadillo repeat 145..181 CDD:293788
armadillo repeat 187..222 CDD:293788
ARM 236..350 CDD:237987
armadillo repeat 239..264 CDD:293788
armadillo repeat 272..308 CDD:293788
armadillo repeat 314..348 CDD:293788
ARM 315..433 CDD:237987
armadillo repeat 356..390 CDD:293788
armadillo repeat 399..433 CDD:293788
Arm_3 442..485 CDD:292804
kpna2NP_001002335.1 SRP1 9..525 CDD:227396
IBB 9..95 CDD:280005
ARM 110..235 CDD:237987
armadillo repeat 112..144 CDD:293788
armadillo repeat 152..188 CDD:293788
armadillo repeat 194..233 CDD:293788
ARM 244..361 CDD:237987
armadillo repeat 250..275 CDD:293788
armadillo repeat 283..319 CDD:293788
armadillo repeat 325..359 CDD:293788
ARM 326..445 CDD:237987
armadillo repeat 367..403 CDD:293788
armadillo repeat 410..444 CDD:293788
armadillo repeat 452..492 CDD:293788
Arm_3 455..505 CDD:292804
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.930

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