DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha3 and KPNA6

DIOPT Version :9

Sequence 1:NP_001163572.1 Gene:Kap-alpha3 / 41158 FlyBaseID:FBgn0027338 Length:514 Species:Drosophila melanogaster
Sequence 2:XP_005270768.1 Gene:KPNA6 / 23633 HGNCID:6399 Length:566 Species:Homo sapiens


Alignment Length:518 Identity:240/518 - (46%)
Similarity:332/518 - (64%) Gaps:33/518 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLQNFKNKGKDQDEMRRRRNEVTVELRKNKREETILKRRNVPNLDSNTDEEEQLSSSIDLKKLAK 72
            |::::||...:.:||||||.|..::|||.|||:.:.|||||..:    :||..:..|:    |..
Human    43 RMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELI----NEEAAMFDSL----LMD 99

  Fly    73 AAADATKPEQ-----------------QLAAVQAARKLLSSDKNPPINDLIQSD-ILPILVECLK 119
            :...:|..|.                 |||..|..|||||.:.:|||:::|.:. ::...||.||
Human   100 SYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLK 164

  Fly   120 QHNHTMLQFEAAWALTNIASGTSAQTNEVVAAGAVPLFLQLLNSPAPNVCEQAVWALGNIIGDGP 184
            ::.:..|||||||||||||||||.||..|:.|||||:|::||||...:|.||||||||||.||..
Human   165 RNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSS 229

  Fly   185 LLRDFVIKHGVVQPLLSFIKPDIPITFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLIHHT 249
            :.||:|:...::.|||:.:.....:|..||..|.:.||||.|:|.|..|.:...||.|:.|:..:
Human   230 VCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSS 294

  Fly   250 DTNILVDTVWAISYLTDGGNDQIQMVIESGVVPKLIPLLGNSEVKVQTAALRAVGNIVTGSDEQT 314
            |:::|.|..||:|||:||.|::||.||:|||..:|:.||.:::.||.:.|||||||||||.|.||
Human   295 DSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQT 359

  Fly   315 QVVLNYDALSYFPGLLSHPKEKIRKEAVWFLSNITAGNQSQVQAVINVGLLPKIIENLSKGEFQT 379
            ||:||..||.....|||.|||.|||||.|.:|||||||::|:||||:..:.|.:||.|.|.||:|
Human   360 QVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRT 424

  Fly   380 QKEAAWAISNLTISGNREQVFTLIKEGVIPPFCDLLSCQDTQVINVVLDGLNNMLKVAD------ 438
            :|||||||:|.|..|..||:..|:..|.|.|.||||:..|::::.|.|:||.|:|::.:      
Human   425 RKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRS 489

  Fly   439 -SHVEAVANCIEECEGLAKIERLQSHENVEIYKLAYEIIDQYFTDEGEQTNMAPTSDGAQYNF 500
             |.|......|||..||.|||.||||||.|||:.|:::|:.||..|.:.:::||..|..|..|
Human   490 GSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQF 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha3NP_001163572.1 IBB 7..88 CDD:280005 30/96 (31%)
SRP1 8..500 CDD:227396 239/516 (46%)
ARM 104..224 CDD:237987 60/120 (50%)
armadillo repeat 104..137 CDD:293788 15/33 (45%)
armadillo repeat 145..181 CDD:293788 23/35 (66%)
armadillo repeat 187..222 CDD:293788 10/34 (29%)
ARM 236..350 CDD:237987 62/113 (55%)
armadillo repeat 239..264 CDD:293788 10/24 (42%)
armadillo repeat 272..308 CDD:293788 20/35 (57%)
armadillo repeat 314..348 CDD:293788 20/33 (61%)
ARM 315..433 CDD:237987 63/117 (54%)
armadillo repeat 356..390 CDD:293788 19/33 (58%)
armadillo repeat 399..433 CDD:293788 13/33 (39%)
Arm_3 442..485 CDD:292804 22/42 (52%)
KPNA6XP_005270768.1 SRP1 66..555 CDD:227396 230/495 (46%)
armadillo repeat 156..182 CDD:293788 14/25 (56%)
armadillo repeat 190..226 CDD:293788 23/35 (66%)
armadillo repeat 232..267 CDD:293788 10/34 (29%)
armadillo repeat 284..309 CDD:293788 10/24 (42%)
armadillo repeat 317..353 CDD:293788 20/35 (57%)
armadillo repeat 359..393 CDD:293788 20/33 (61%)
armadillo repeat 401..437 CDD:293788 20/35 (57%)
armadillo repeat 444..478 CDD:293788 13/33 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2158
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.860

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