DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16790 and usb1

DIOPT Version :10

Sequence 1:NP_649911.1 Gene:CG16790 / 41155 FlyBaseID:FBgn0037713 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_031755725.1 Gene:usb1 / 100145778 XenbaseID:XB-GENE-948670 Length:256 Species:Xenopus tropicalis


Alignment Length:265 Identity:96/265 - (36%)
Similarity:144/265 - (54%) Gaps:24/265 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALVDYGGSSSSASEDEDCTENIQTPALITLKRPALPKAATLLGPKKPKPEEFVEDVVDDPAEHG 65
            ||||.|     |:|||:: .|..:.|....   |.||...|:|...:.:.:   ::.:||..:||
 Frog     7 MALVSY-----SSSEDDE-GETTEPPGRFL---PPLPPPTTVLRMFQDRED---DEGLDDRTKHG 59

  Fly    66 GRMRSFKHERGNWATYVYV---PATACVDQLEEFQTEAIARLEPHLELQPNESLHLSLSRTVVLQ 127
            ||:|||.|||||||||||:   |....:|.::|..:.|   .|..:.|......|:|.|:||||:
 Frog    60 GRIRSFTHERGNWATYVYIPFQPQDEFLDLVDELLSVA---AEHGVFLTKMSEFHISQSQTVVLR 121

  Fly   128 YHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPLDAAFVEKMTAILQPIDQVML 192
            :|.|:.|..||:..|:....|......:::|||:|:||||:...:... .|.:..::..:||.:.
 Frog   122 HHWINPFIESLKDKLHCMYRFLCIADRIKVYTNQEKTRTFLGLEVSVG-SEHLLEVVSEVDQSLK 185

  Fly   193 DYRLQQFYDPASFHVSLLWCVGDQETLLNEK-LTELKELLD---DQDKLC-LAVNEVHLKCGNKD 252
            ::.||.||:..|||:||.|||||:...|... |.||::::|   |.|.|. ....|:..|.|||.
 Frog   186 EFNLQTFYEEPSFHMSLAWCVGDKAGKLEGSCLVELQKVIDRFEDSDILTRFNAEEIRCKAGNKT 250

  Fly   253 FTYSL 257
            |...|
 Frog   251 FCIPL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16790NP_649911.1 HVSL 34..254 CDD:462880 83/227 (37%)
usb1XP_031755725.1 HVSL 38..254 CDD:462880 81/222 (36%)

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