DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16790 and usb1

DIOPT Version :9

Sequence 1:NP_649911.1 Gene:CG16790 / 41155 FlyBaseID:FBgn0037713 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_031755725.1 Gene:usb1 / 100145778 XenbaseID:XB-GENE-948670 Length:256 Species:Xenopus tropicalis


Alignment Length:265 Identity:96/265 - (36%)
Similarity:144/265 - (54%) Gaps:24/265 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALVDYGGSSSSASEDEDCTENIQTPALITLKRPALPKAATLLGPKKPKPEEFVEDVVDDPAEHG 65
            ||||.|     |:|||:: .|..:.|....   |.||...|:|...:.:.:   ::.:||..:||
 Frog     7 MALVSY-----SSSEDDE-GETTEPPGRFL---PPLPPPTTVLRMFQDRED---DEGLDDRTKHG 59

  Fly    66 GRMRSFKHERGNWATYVYV---PATACVDQLEEFQTEAIARLEPHLELQPNESLHLSLSRTVVLQ 127
            ||:|||.|||||||||||:   |....:|.::|..:.|   .|..:.|......|:|.|:||||:
 Frog    60 GRIRSFTHERGNWATYVYIPFQPQDEFLDLVDELLSVA---AEHGVFLTKMSEFHISQSQTVVLR 121

  Fly   128 YHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPLDAAFVEKMTAILQPIDQVML 192
            :|.|:.|..||:..|:....|......:::|||:|:||||:...:... .|.:..::..:||.:.
 Frog   122 HHWINPFIESLKDKLHCMYRFLCIADRIKVYTNQEKTRTFLGLEVSVG-SEHLLEVVSEVDQSLK 185

  Fly   193 DYRLQQFYDPASFHVSLLWCVGDQETLLNEK-LTELKELLD---DQDKLC-LAVNEVHLKCGNKD 252
            ::.||.||:..|||:||.|||||:...|... |.||::::|   |.|.|. ....|:..|.|||.
 Frog   186 EFNLQTFYEEPSFHMSLAWCVGDKAGKLEGSCLVELQKVIDRFEDSDILTRFNAEEIRCKAGNKT 250

  Fly   253 FTYSL 257
            |...|
 Frog   251 FCIPL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16790NP_649911.1 HVSL 34..254 CDD:286792 83/227 (37%)
usb1XP_031755725.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4874
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11611
Inparanoid 1 1.050 147 1.000 Inparanoid score I4316
OMA 1 1.010 - - QHG52902
OrthoDB 1 1.010 - - D1507496at2759
OrthoFinder 1 1.000 - - FOG0007343
OrthoInspector 1 1.000 - - oto104373
Panther 1 1.100 - - LDO PTHR13522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1612
SonicParanoid 1 1.000 - - X5460
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.