DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and AFG2

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_013501.1 Gene:AFG2 / 851113 SGDID:S000004389 Length:780 Species:Saccharomyces cerevisiae


Alignment Length:799 Identity:151/799 - (18%)
Similarity:269/799 - (33%) Gaps:202/799 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ERQHQDVETTVATMNAAVGSVAADADAKALLQSSLYEFYLRYICLSNRLEDVYDNMIQPQKRQLV 90
            |..|.....|::|...:||::.. .|...|.::.:...|...:.:.: |:..  |:::..:.:::
Yeast    88 EEVHPVNVITLSTTIRSVGNLIL-GDRLELKKAQVQPPYATKVTVGS-LQGY--NILECMEEKVI 148

  Fly    91 RKLLD----ACLGRVVE-LKH-------DLVNIDLMEFSYNDEVVERLRLTPMETEL-----RIP 138
            :||||    ...|.:.: ||.       |:|..|..:.|..|.....|.:..|...|     ..|
Yeast   149 QKLLDDSGVIMPGMIFQNLKTKAGDESIDVVITDASDDSLPDVSQLDLNMDDMYGGLDNLFYLSP 213

  Fly   139 RYFLRERQQELEFRKKTMHEILTKLGWLEEHELEETVT--------TEIEAIRM---LQMHERAR 192
            .:..|:....:.|.|:|...        .::.|.|.::        .|||:::.   :.:|    
Yeast   214 PFIFRKGSTHITFSKETQAN--------RKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLH---- 266

  Fly   193 QGRLRAHFMKEIRILKEKGKSEERTEKERSDSGLLAAMKIQKMWRGHTARRITRRRKMEEMILIG 257
            |..|.:.|          |.|..|........|....|.::.:.....|..:|            
Yeast   267 QPTLFSSF----------GVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLT------------ 309

  Fly   258 MLPPPPAVVK---ERAEKLEKLQHNEKRYQAQAFYGKEFE----ERQNALKEEIRAKHGASMKED 315
             :..|..|.|   |....|..:.:..::||....:..|.:    .|.|....|:.::..|::   
Yeast   310 -INGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATL--- 370

  Fly   316 IADEIRAWVKDCYDKTGKLPDFPSEDQGGSLH-IFSRPGTESEHSRSSARSSKESRKTKDKSKSP 379
                  ..:.|.....||:....:.::..|:. ...|||                          
Yeast   371 ------LTLMDGMGAAGKVVVIAATNRPNSVDPALRRPG-------------------------- 403

  Fly   380 ARSGDLNVNENQDEEVSFQPAPSVCLPDIRAEIDLFNDTW-RDKDETGVLSQAAYEDMIYSDKYQ 443
                      ..|:||      .:.:||:.|..|:....: |...:..||...|.: .|.|..:.
Yeast   404 ----------RFDQEV------EIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIK-YIASKTHG 451

  Fly   444 EVELEF----RRAVDDVMRQEIELLQTAVG--KKVKKSSKKTRRSGKKSKKKKEKDLTPDRTTES 502
            .|..:.    |.:|       ::.:|..:|  ..:.|.|.|..   .|..:....|:.|....| 
Yeast   452 YVGADLTALCRESV-------MKTIQRGLGTDANIDKFSLKVT---LKDVESAMVDIRPSAMRE- 505

  Fly   503 LYEELVTNGIIRKYPELRLKQFLGDKALTARIGTNPSPGDIRQILTEYCILPLGSDAIHNCTPL- 566
                     |..:.|::......|.:.|..:             :.|...|||  :|......| 
Yeast   506 ---------IFLEMPKVYWSDIGGQEELKTK-------------MKEMIQLPL--EASETFARLG 546

  Fly   567 ---IRSILLAGPKGSGKKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQ 628
               .:.:||.||.|..|.....|:.||.|.....:....|..||.|:|.  ..|..:.:.:|...
Yeast   547 ISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESE--RAIREIFRKARSAA 609

  Fly   629 PAVIFMGDAERPFMKKIPKTDRTDPKRLKKDLPKLIKNIAPEDR---VVFIGTSNLPWEADQKLL 690
            |::||..:.:    ...|..|.:........|..|:..|...:.   ||.:..:|.|.|.|..||
Yeast   610 PSIIFFDEID----ALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALL 670

  Fly   691 Q-SVYNRFIYIPRPDYGAMSHAWKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDACLKEVMTCK 754
            : ...:|.||:..||..|.....|.....::...|.:|...:|..::||:...:      |:.|:
Yeast   671 RPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEV------VLLCQ 729

  Fly   755 R-------------KLQLR 760
            .             |::||
Yeast   730 EAGLAAIMEDLDVAKVELR 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164 34/198 (17%)
SpoVK 443..773 CDD:440232 72/345 (21%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 41/165 (25%)
AFG2NP_013501.1 CDC48 51..773 CDD:273521 151/799 (19%)

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