DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16789 and AT4G24860

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_194217.2 Gene:AT4G24860 / 828589 AraportID:AT4G24860 Length:1122 Species:Arabidopsis thaliana


Alignment Length:530 Identity:104/530 - (19%)
Similarity:205/530 - (38%) Gaps:118/530 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 TESEHSRSSARSSKESRKTKDKSKSPARSGDLNVNENQDEEVSFQPAPSVCLPDIRAEIDLFNDT 418
            |.|:|.:     .|:..:.|.:.|....:.:| :.|..:.:::.|      :|.....:.|:...
plant   642 THSDHLK-----VKDIGRQKKQGKEVPHATEL-LAELFENKITIQ------MPQDEKRLTLWKHQ 694

  Fly   419 W-RDKDETGVLSQAAYEDMIYSDKYQEVE-LE---FRRAVDD--VMRQEIE-LLQTAVGKKVKKS 475
            . ||.:.:.|.|...:..|:...:....| ||   .|..:.|  :.|..:| ::..|.|..:.|:
plant   695 MDRDAETSKVKSNFNHLRMVLRRRGLGCEGLETTWSRMCLKDLTLQRDSVEKIIGWAFGNHISKN 759

  Fly   476 -----SKKT--RRS-------------GKKSKKKKEKDLTPDRTTESLYEELVTNGIIRKYPELR 520
                 :|.|  |.|             |..|.||       |...|:::|               
plant   760 PDTDPAKVTLSRESIEFGIGLLQNDLKGSTSSKK-------DIVVENVFE--------------- 802

  Fly   521 LKQFLGDKALTARIGTNPSPGD-----------IRQILTEYCILPLGSDAIH---NCTPLIRSIL 571
             |:.|.|..|       ||..|           ::.||.|..:|||....:.   ..|...:.||
plant   803 -KRLLSDVIL-------PSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGIL 859

  Fly   572 LAGPKGSGKKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGD 636
            |.||.|:||..|..|:..|..|...:::.::|..|:.|:..  ..:..|..::..:.|:|||:.:
plant   860 LFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGE--KYVKAVFSLASKMSPSVIFVDE 922

  Fly   637 AERPFMKKIPKTDRTDPKRLKKDLPKLIKNIAPE--DRVVFIGTSNLPWEADQKLLQSVYNRFIY 699
            .:....::....:....:::|.:.......:..:  :||:.:..:|.|::.|:.:::.:..| :.
plant   923 VDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIRRLPRR-LM 986

  Fly   700 IPRPDYGAMSHAWKTLL--HDYSGGISNLDTSAMAKISDGYTIGSI-DAC-------LKEVMTCK 754
            :..||....:...|.:|  .|.|   .:||...:|.:::||:...: :.|       :||::. |
plant   987 VGLPDTSNRAFILKVILAKEDLS---PDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILE-K 1047

  Fly   755 RKLQLRT--------QPLTNAELINVLCSRDPVYREEEEAFESWWSKTPLGRRRQRFLELEEERL 811
            .|.:...        .||:.:..:..|...|  :|:..:     |....:.........|::...
plant  1048 EKRERDAALAQGKVPPPLSGSSDLRALNVED--FRDAHK-----WVSASVSSESATMTALQQWNK 1105

  Fly   812 LEEQAQAAKQ 821
            |..:..:.||
plant  1106 LHGEGGSGKQ 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 80/390 (21%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 35/173 (20%)
AT4G24860NP_194217.2 McrB 710..>878 CDD:441011 46/197 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 821..987 CDD:476819 34/168 (20%)
AAA_lid_3 1011..1047 CDD:465537 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.