DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and AT4G24710

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_194202.4 Gene:AT4G24710 / 828573 AraportID:AT4G24710 Length:479 Species:Arabidopsis thaliana


Alignment Length:349 Identity:66/349 - (18%)
Similarity:124/349 - (35%) Gaps:97/349 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 LTPDRTTESLYEELVTNGIIRKYPELRLKQFLGDKALTARIGTNPSPGDIRQILTEYCILPLGSD 558
            :.|.:..:.|:|.|:....:::    ||.::.....|..:.|.||                    
plant   168 ILPAKEFDGLWESLIYESGLKQ----RLLRYAASALLFTQKGVNP-------------------- 208

  Fly   559 AIHNCTPLIRSILLAGPKGSGKKALLHAICTEVG---------AVLFDLTPANIVGKYPGKSGLI 614
               |.....|.|||.||.|:||.:|..|:..::.         ..|.::...::..|:..:||  
plant   209 ---NLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESG-- 268

  Fly   615 MLIHLVLKVSRLLQPAV--------IFMGDAERPFMKK---IPKTDRTDPKRLKKDLPKLIKNIA 668
               .||.|:.:.:|..|        :.:.:.|.....:   :..::.:|..|:...|...:..:.
plant   269 ---KLVAKLFQKIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK 330

  Fly   669 PEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDY--SGGISNLDTSAM 731
            ....|:.:.|||:....|...:.....: .|:..|.........::.:.:.  .|.||:...   
plant   331 SAPNVIILTTSNITTAIDVAFVDRADIK-AYVGPPTLHVRYEILRSCVEELISKGIISSFQG--- 391

  Fly   732 AKISDGYTIGSIDACLKEVMT-------------CKRKLQ------------LRTQP-LTNAELI 770
               .||.:|.|..: |||.::             ||:.::            ||..| |.:|.|.
plant   392 ---CDGLSIPSFSS-LKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALA 452

  Fly   771 --------NVLCSR-DPVYREEEE 785
                    |.||:. :...||:.|
plant   453 DPYSHDPSNFLCTMIETAKREKSE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 61/334 (18%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 30/177 (17%)
AT4G24710NP_194202.4 RecA-like_Pch2-like 163..361 CDD:410916 40/225 (18%)
Blue background indicates that the domain is not in the aligned region.

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