DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and AT2G45500

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001323445.1 Gene:AT2G45500 / 819158 AraportID:AT2G45500 Length:497 Species:Arabidopsis thaliana


Alignment Length:497 Identity:110/497 - (22%)
Similarity:193/497 - (38%) Gaps:98/497 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 SKESRKTKDKSKSPARSGDLN-------VNENQDEEVS--FQPAPSVCLPDIRAE--------ID 413
            ::||:|....|.|...|..:|       .||....::.  |..|.......:|||        :.
plant    26 NEESKKDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLAKEEIAKGVRAEEWGLHDDALL 90

  Fly   414 LFNDTWRDKDETGVLSQAAYEDMIYSDKYQEVELEFRRAVDDVMRQEIELLQT-AVGKKVKK--- 474
            .:.:..|..:|.......:|   |.|.:.::|. .:|..:.:...|..|.||. .||....|   
plant    91 HYRNAQRIMNEATSTPSPSY---ISSSEKEKVR-SYREKISNWQNQVSERLQALGVGMSENKRTV 151

  Fly   475 --------SSKKTRRSGKKSKK-----------KKEKDLT----PDRTTESLYE----ELVTNGI 512
                    ||..:|.....|:|           :..||..    |.:.:.::|:    |::...|
plant   152 AYPSSASVSSTASRYRKTLSQKTPVARGGVATPRNPKDAAASPKPVKESGNVYDDKLVEMINTTI 216

  Fly   513 IRKYPELRLKQFLGDKALTARIGTNPSPGDIRQILTEYCILPL-GSDAIHNCTPLIRSILLAGPK 576
            :.:.|.::.....|             ....:|.|.|..|||. ..|.........|.:||.||.
plant   217 VDRSPSVKWDDVAG-------------LNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGPP 268

  Fly   577 GSGKKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPF 641
            |:||..|..|:.:|..|..|:::.:::..|:.|::..::.....:.:||  ||:||||.:.: ..
plant   269 GNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISR--QPSVIFMDEID-SI 330

  Fly   642 MKKIPKTDRTDPKRLKKDLPKLIKNIA--PEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPD 704
            |.....::....:|||.:.......:.  |:|.|:.||.:|.|.|.|..:|:.:..| ||:|.||
plant   331 MSTRSTSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLRRLVKR-IYVPLPD 394

  Fly   705 YGAMSHAWKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDA-CLKEVMTCKRKLQLRTQPLTNAE 768
            .......:||.|......:|:.|...:.|.::||:...:.| |.:..|...|:|        .|.
plant   395 SNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIREL--------GAN 451

  Fly   769 LINVLCS-----------------RDPVYREEEEAFESWWSK 793
            ::.:..:                 |..:.:.:.|..|.|.|:
plant   452 ILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKWEELERWNSE 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 86/364 (24%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 46/160 (29%)
AT2G45500NP_001323445.1 MIT_spastin 62..140 CDD:239142 16/81 (20%)
RecA-like_spastin 227..390 CDD:410932 47/179 (26%)
AAA_lid_3 417..452 CDD:465537 10/42 (24%)
Vps4_C <455..495 CDD:462762 5/39 (13%)
Blue background indicates that the domain is not in the aligned region.

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