Protein Alignment CG16789 and Afg2b

DIOPT Version :10

• Sequence 1: NP_649910.3
• Gene: CG16789 / 41154
• FlyBaseID: FBgn0037712
• Length: 831
• Species: Drosophila melanogaster
• Sequence 2: NP_001103117.1
• Gene: Afg2b / 691729
• RGDID: 1595990
• Length: 747
• Species: Rattus norvegicus
• Alignment Length: 276
• Identity: 64/276 - (23%)
• Similarity: 108/276 - (39%)
• Gaps: 57/276 - (20%)

  Fly   535 GTNPSPGDIRQILTEYCILPLGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGAVLFDLT 599
            |.:.:...:|::|......||...|:....|  |.:|||||.|.||..|:.|:..|.||.|..::
  Rat   197 GLSETADSLRELLRLPLCYPLALAALGLAVP--RGVLLAGPPGVGKTQLVRAVAREAGAELLAVS 259

  Fly   600 PANIVGKYPGKSGLIMLIHLVLKVSRLLQ---------PAVIFMGDAERPFMKKIPK---TDRTD 652
            ...:.|..||::        ...|.|:.|         |:::|:.:.:    ...|:   ..|..
  Rat   260 APALQGTRPGET--------EENVRRVFQRAQELASRGPSLLFLDEVD----ALCPRRGGPQRAP 312

  Fly   653 PKRLKKDLPKLIKNIAPEDRVVFIGTSNLPWEADQKLLQ-SVYNRFIYIPRPD-------YGAMS 709
            ..|:...:..|:..|..:..||.:|.:|.|.|.|..|.: ..::|.:.|..|.       .|.::
  Rat   313 ESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVIT 377

  Fly   710 HAWKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDACLKEVMTCKRKLQLRTQPLTNAELINVLC 774
            .......|        :|...:|:::.||....:.|..:|..||             |.|.|...
  Rat   378 SKMPISSH--------IDLGLLAEMTVGYVGADLTALCREAATC-------------ALLKNEKN 421

  Fly   775 SRDPVYREEE--EAFE 788
            ..:|...|.:  |||:
  Rat   422 QNNPKIEETDFLEAFK 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG16789	NP_649910.3	DUF5401	<131..>307	CDD:375164
		SpoVK	443..773	CDD:440232	59/257 (23%)
		P-loop containing Nucleoside Triphosphate Hydrolases	542..700	CDD:476819	43/170 (25%)
Afg2b	NP_001103117.1	CDC48	14..738	CDD:273521	64/276 (23%)