DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and Afg2a

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001156983.1 Gene:Afg2a / 57815 MGIID:1927170 Length:893 Species:Mus musculus


Alignment Length:442 Identity:97/442 - (21%)
Similarity:163/442 - (36%) Gaps:92/442 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 SRPGTESEHSRSSARSSKESRKTKDKSKSPARSGDLNVNENQDEEVSFQPAPSVCLPDIRAEIDL 414
            |..||::: ..:|..||.||                     .|.::|||          .:::||
Mouse   207 SASGTDAQ-GMASEHSSMES---------------------SDVDLSFQ----------LSQLDL 239

  Fly   415 FNDTWRDKDETGVLSQAA----YEDMIYSDKYQEVELEFRRAVDDVMRQEIELLQTAVGKKVKKS 475
                   |:.....||:.    ..|... :|..||.|:..::..|.....:|   .:.|.|....
Mouse   240 -------KEPQSPSSQSTPCKPTNDRTV-NKAGEVLLDVTQSPRDGSGLGLE---ESTGLKCSFD 293

  Fly   476 SKKTRRSGKKSKKKKEKDLTP-----DRTTESLY----------EELVTNGIIRKYPELRLK--- 522
            |.|   .|......:||.|.|     ...|::.|          .::.||.   |..:.:.|   
Mouse   294 SSK---EGNTQPVSEEKLLKPASAGTKSNTDTFYFISSTTRINLRKICTNS---KEQDSQFKVTY 352

  Fly   523 QFLGDKALTARIGTNPSPGDIRQILTEYCILPLGSDAIHNC--TPLIRSILLAGPKGSGKKALLH 585
            ..:|        |.|.....||:|:.    |||....:...  .|..|.:||.||.|:||..:..
Mouse   353 DMIG--------GLNSQLKAIREIIE----LPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIAR 405

  Fly   586 AICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKKIPKTDR 650
            |:..||||.:..:....|:.|:.|::.  ..:..:...:.|..|::||:.:.:....|:......
Mouse   406 AVANEVGAYVSVINGPEIISKFYGETE--ARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468

  Fly   651 TDPKRLKKDLPKLIKNI---APEDRVVFIGTSNLPWEADQKLLQ-SVYNRFIYIPRPDYGAMSHA 711
            .: ||:...|..|:..|   ..|.||:.:|.:|.|...|..|.: ..:::.|.|..|:.......
Mouse   469 VE-KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDI 532

  Fly   712 WKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDACLKEVMTCKRKLQLRTQP 763
            .:.||......::..:...:|..:.||....:.|...|......:..||.||
Mouse   533 LQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 78/345 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 42/163 (26%)
Afg2aNP_001156983.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
CDC48_N 64..132 CDD:451359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..227 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..315 20/89 (22%)
CDC48 <323..889 CDD:273521 63/280 (23%)
Blue background indicates that the domain is not in the aligned region.

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