DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and nsfb

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001019625.3 Gene:nsfb / 554200 ZFINID:ZDB-GENE-050808-1 Length:747 Species:Danio rerio


Alignment Length:423 Identity:88/423 - (20%)
Similarity:150/423 - (35%) Gaps:81/423 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 LPDIRAEIDLFN-DTWRDKDETGVLSQAAYEDMIYSDK-YQEVELE--FRRAVDDVMRQEIELLQ 465
            |||....:.:.| .|.:.|....:......:::....| |...|||  .|.|....|.:.|:...
Zfish   397 LPDETGRVQILNIHTAKMKQSNMLAKDVDVKELAVETKNYSGAELEGLVRAAQSTAMNRHIKATT 461

  Fly   466 TAVGKKVKKSSKKTRRSGKKSKKKKEKDLTPD-RTTESLYEELVTNGIIRKYPELRLKQFLGDKA 529
            .......|..:.:..||...:  ....|:.|. .:.:..|...:.|||: |:.. .:...|||..
Zfish   462 QVEVDTEKAQTLQVSRSDFLA--SLNNDIKPAFGSNQEDYSSYIMNGIV-KWSN-AVSDILGDGE 522

  Fly   530 LTARIGTNPSPGDIRQILTEYCILPLGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGAV 594
            |..:...|...                       |||: ::||.||..|||.||...|..:....
Zfish   523 LLVQQTKNSER-----------------------TPLV-TVLLEGPAHSGKTALAAKIAEQSQFP 563

  Fly   595 LFDL-TPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKKIPKTDRTDPKRLKK 658
            ...: :|..::|.  .::.....|..:.:.:...|.:.:.:.|.|| .:..:|...|.....|:.
Zfish   564 FIKICSPDKMIGF--TETAKCQAIKKIFEDAYKSQLSCVVVDDIER-LLDFVPIGPRFSNLVLQA 625

  Fly   659 DLPKLIKNIAPEDR-VVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDYSGG 722
             |..|:|...|..| ::.:||::......:..:...::..|:||....|  .|..:.|  :..||
Zfish   626 -LLVLLKKPPPRGRKLLILGTTSRKDVLQEMGMSDSFSTTIHIPNISTG--EHLMEAL--ELLGG 685

  Fly   723 ISNLDTSAMAKISDGYTIGSIDACLKEVMTCKRKLQLRTQPLTNAELINVLCSRDPVYREEEEAF 787
            ....:.:.:.|...|          :.|....:|||:         ||.:..             
Zfish   686 FQEEERANIGKQVKG----------QSVWLGIKKLQM---------LIEMSL------------- 718

  Fly   788 ESWWSKTPLGRRRQRFLE-LEEERLLEEQAQAA 819
                 :.||..|.|:||. |:||..|.....||
Zfish   719 -----QMPLEYRVQKFLALLKEEGALGSDKNAA 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 68/334 (20%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 31/159 (19%)
nsfbNP_001019625.3 None
Blue background indicates that the domain is not in the aligned region.

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