DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and Spast

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001156342.1 Gene:Spast / 50850 MGIID:1858896 Length:614 Species:Mus musculus


Alignment Length:591 Identity:124/591 - (20%)
Similarity:227/591 - (38%) Gaps:147/591 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 PPPPAVVKERAEKLEKLQHNEKRYQAQAFYGKEFEERQNALKEEIRAKHGASMKEDIADEIRAWV 324
            ||.|....| ||.:            :.|:.:.||....||:  |..:..|..||...:    |.
Mouse   102 PPEPGPGGE-AESV------------RVFHKQAFEYISIALR--IDEEEKAGQKEQAVE----WY 147

  Fly   325 KDCYDKTGKLPDFPSEDQGGSLHIFSRPGTESEHSRS-SARSSKESRKTKDKSKSPARSGDLNVN 388
            |...::..|          |...|.:..|.:.|.:|. .|:........||:         |.:.
Mouse   148 KKGIEELEK----------GIAVIVTGQGEQYERARRLQAKMMTNLVMAKDR---------LQLL 193

  Fly   389 ENQDEEVSFQPAPSVCLPDIRAEIDLFND----TWRD---KDETGVLSQAAYEDMIYSDKYQEVE 446
            |.....:.|.          :::.|::|:    |.|:   :.|:|.:.:.  :|.:         
Mouse   194 EKLQPVLQFS----------KSQTDVYNESTNLTCRNGHLQSESGAVPKR--KDPL--------- 237

  Fly   447 LEFRRAVDDVMRQEIELLQTAVG--------------------------KKVKKSSKKTRRSGKK 485
               ..|.:.:.|.:..|...:.|                          ....|.:.|..|:.|.
Mouse   238 ---THASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNKP 299

  Fly   486 SKK----KKEKDLTPDRTTES-----LYEELVTNGIIRKYPELRLKQFLGDKALTARIGTNPSPG 541
            |..    :|:|||...|..:|     :..|:|.||...|:.::..::.                 
Mouse   300 STPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQEL----------------- 347

  Fly   542 DIRQILTEYCILP-LGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGAVLFDLTPANIVG 605
             .:|.|.|..||| |..:.........|.:||.||.|:||..|..|:..|..|..|:::.|::..
Mouse   348 -AKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTS 411

  Fly   606 KYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKKIPKTDRTDPKRLKKDLPKLIK----N 666
            ||.|:..  .|:..:..|:|.|||::||:.:.:....:: .:.:....:|||.:.  ||:    .
Mouse   412 KYVGEGE--KLVRALFAVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKTEF--LIEFDGVQ 471

  Fly   667 IAPEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDYSGGISNLDTSAM 731
            .|.:|||:.:|.:|.|.|.|:.:|:....| :|:..|:........|.||......::..:.:.:
Mouse   472 SAGDDRVLVMGATNRPQELDEAVLRRFIKR-VYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL 535

  Fly   732 AKISDGYTIGSIDACLKEVMTCKRKLQLRTQPLTN---AELINVLCS---------RDPVYREEE 784
            |:::|||:...:.|..|:......: :|:.:.:.|   :|:.|:..|         :..|..:..
Mouse   536 ARMTDGYSGSDLTALAKDAALGPIR-ELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTL 599

  Fly   785 EAFESW 790
            ||:..|
Mouse   600 EAYIRW 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164 12/46 (26%)
SpoVK 443..773 CDD:440232 83/372 (22%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 48/162 (30%)
SpastNP_001156342.1 Required for interaction with RTN1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..298 43/257 (17%)
Required for midbody localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..192 27/127 (21%)
Required for interaction with ATL1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..78
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..48
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 4..11
Required for interaction with SSNA1 and microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 48..85
Nuclear export signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 57..65
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 4/10 (40%)
Sufficient for interaction with CHMP1B. /evidence=ECO:0000250|UniProtKB:Q9UBP0 110..194 24/121 (20%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 112..198 23/122 (19%)
MIT_spastin 114..193 CDD:239142 21/115 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..306 12/99 (12%)
Sufficient for microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 226..614 91/419 (22%)
Required for interaction with microtubules and microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 268..326 11/57 (19%)
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 307..310 1/2 (50%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 308..310 1/1 (100%)
RecA-like_spastin 341..504 CDD:410932 48/186 (26%)
AAA_lid_3 531..585 CDD:465537 11/54 (20%)
Vps4_C <578..610 CDD:462762 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.

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