DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and NSF

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_006169.2 Gene:NSF / 4905 HGNCID:8016 Length:744 Species:Homo sapiens


Alignment Length:437 Identity:91/437 - (20%)
Similarity:160/437 - (36%) Gaps:129/437 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 QDEEVS---FQPAPSVCLPDIRAEIDLFNDTWRDKDETGVLSQAA-----YEDMIYSDKYQEV-- 445
            |:.|||   |..|.. |:..:..|||.......|.:.......||     :.:..:|...|.|  
Human    76 QEIEVSLYTFDKAKQ-CIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFS 139

  Fly   446 --ELEFRRAVDDVMRQEIELL--QTAVGKKVK-----------KSSKKTRRS-----GK-KSKKK 489
              |..|...|.|:...:..:|  :.|.||:.|           .:.:|...|     || |:|:.
Human   140 FNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKEN 204

  Fly   490 KEKDLTPDRTTESLYEELVTNGIIRKYPELRLKQFLGDKALTARIGTNPSPGDIRQILTEYCILP 554
            ::..:.||..    :|::...|:.:::.::..:.|      .:|:.   .|..:.|:..::    
Human   205 RQSIINPDWN----FEKMGIGGLDKEFSDIFRRAF------ASRVF---PPEIVEQMGCKH---- 252

  Fly   555 LGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGAVLFDLTP-----ANIVGKYPGKS--- 611
                        ::.|||.||.|.||..|    ..::|.:|....|     ..|:.||.|:|   
Human   253 ------------VKGILLYGPPGCGKTLL----ARQIGKMLNAREPKVVNGPEILNKYVGESEAN 301

  Fly   612 ---------------GLIMLIHLVL--KVSRLLQPAVIFMGDAERPFMKKIPKTDRTDPKRLKKD 659
                           |....:|:::  ::..:.:         :|..|........|...:|   
Human   302 IRKLFADAEEEQRRLGANSGLHIIIFDEIDAICK---------QRGSMAGSTGVHDTVVNQL--- 354

  Fly   660 LPKLIKNIAPEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDYSG--G 722
            |.| |..:...:.::.||.:|.|...|:.||           ||  |.:....:..|.|..|  .
Human   355 LSK-IDGVEQLNNILVIGMTNRPDLIDEALL-----------RP--GRLEVKMEIGLPDEKGRLQ 405

  Fly   723 ISNLDTSAMAKISDGYTIGSIDACLKEVMTCKRKLQLRTQPLTNAEL 769
            |.::.|:.|.    |:.:.|.|..:||       |.:.|:..:.|||
Human   406 ILHIHTARMR----GHQLLSADVDIKE-------LAVETKNFSGAEL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 77/377 (20%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 34/182 (19%)
NSFNP_006169.2 CDC48_N 6..83 CDD:215012 4/6 (67%)
CDC48_2 111..183 CDD:215011 14/71 (20%)
CDC48 159..>606 CDD:273521 71/353 (20%)
RecA-like_NSF-SEC18_r1-like 219..395 CDD:410912 41/230 (18%)
Blue background indicates that the domain is not in the aligned region.

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