DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and Nsf2

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster


Alignment Length:457 Identity:89/457 - (19%)
Similarity:155/457 - (33%) Gaps:157/457 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 VCLPDIRAEIDLFN-DTWRDKDETGVLSQAAYEDMIYSDK-YQEVELE-FRRAVDDVMRQEIELL 464
            :.||:.:..:.:.| .|.|.:|...:.|.....::....| :...||| ..||..          
  Fly   400 ISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQ---------- 454

  Fly   465 QTAVGKKVKKSSK---------KTRRSGKKSKKKKEKDLTPD-RTTESLYEELVTNGIIRKYPEL 519
            .||:.:.:|..||         |.|.:........:.|:.|. ...:.:.|.|:..|||...|. 
  Fly   455 STAMNRLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPP- 518

  Fly   520 RLKQFLGDKALTA-RIGTNPSPGDIRQILTEYCILPLGSDAIHNCTPLIRSILLAGPKGSGKKAL 583
             :.:.|.|..|:. :.....|.|                         :.|:|:.|...|||.||
  Fly   519 -VTELLEDGMLSVQQAKATESSG-------------------------LVSVLIEGAPNSGKSAL 557

  Fly   584 LHAICTEVGAVLFDL------TPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFM 642
            ...:     |.|.|.      :|.::||              ..:.::.|....|| .||.|..:
  Fly   558 AANL-----AQLSDFPFVKVCSPEDMVG--------------FTESAKCLHIRKIF-DDAYRSTL 602

  Fly   643 KKIPKTDRTDPKRLKKDLPKLIKNIAPEDRVVFIGT-----SNLPWEADQKLLQSVYNRFIYIPR 702
            ..|                 ::.|:   :|::..|.     |||..:|...||:.         :
  Fly   603 SCI-----------------VVDNV---ERLLDYGPIGPRYSNLTLQALLVLLKK---------Q 638

  Fly   703 PDYG------------------AMSHAWKTLLHDYSGGISNLDT--SAMAKISDGYTIGSIDACL 747
            |..|                  .|..|:.::||     :|||.|  :.:|.:.|......     
  Fly   639 PPKGRKLLILCTSSRRDVLEEMEMLSAFTSVLH-----VSNLSTPENVLAVLDDSDLFSP----- 693

  Fly   748 KEVMTCKRKLQLRTQPLTNAELINVLCSRDPVYREEEEAFESWWSKTPLGRRRQRFL-ELEEERL 811
            :|:.:..||:..:...:...:|:.::   |.:.:.|..            :|..:|| ::|||..
  Fly   694 EELQSIARKMAGKRLCIGIKKLLALI---DMIRQSEPH------------QRVIKFLSKMEEEGG 743

  Fly   812 LE 813
            ||
  Fly   744 LE 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 71/372 (19%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 30/168 (18%)
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 89/457 (19%)
CDC48 <225..>611 CDD:273521 55/287 (19%)
Blue background indicates that the domain is not in the aligned region.

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