DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and nvl

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_998649.1 Gene:nvl / 406805 ZFINID:ZDB-GENE-040426-2871 Length:796 Species:Danio rerio


Alignment Length:610 Identity:119/610 - (19%)
Similarity:202/610 - (33%) Gaps:199/610 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 KGKSEERTEKERSDSGLLAAMKIQKMWRGHTARRITRRRKMEEMILIGMLPPPPAVVKERAEKLE 274
            |.::::..:.....|.|....:|:...|..||.||                        :.||:.
Zfish    22 KTRNDQYVDVSAMASELQQQFRIEYGRRNRTAFRI------------------------QVEKVF 62

  Fly   275 KLQHNEKRYQAQAFYGKEFEERQNALKEEIRAKHGASMKEDIADEIRAWVKDCYDKTGKLPDFPS 339
            .|..:|...:..|...|...:|.....|:....|..:...|..|:|                   
Zfish    63 ALICSESDSEFSALENKHLAKRARRSPEDGDGSHVTASSTDSEDDI------------------- 108

  Fly   340 EDQGGSLHIFSRPGTESEHSR--SSARSSKESRKTKDKSKSPARSGDLNVNENQDEEVSFQPAPS 402
                          .|.||:.  :|:.:|...|...:.|.|......|                 
Zfish   109 --------------PEHEHTNHMNSSLTSLYQRGAANASSSSTIQRSL----------------- 142

  Fly   403 VCLPDIRAEIDLFNDTWRDKDETGVLSQAAYEDMIYSDKYQE---VELEFRRAVDDVMRQEIELL 464
                         :|.| ..|:||             |:.||   ::|....:.....:::...|
Zfish   143 -------------SDDW-IIDKTG-------------DRGQESILIDLCEEESSSTTNQRDSSRL 180

  Fly   465 QTAVGKKVKKSSKKTRRSGKKSKKKKEKDLT---PDRTTESLYEELVTNGIIRKYPELRLKQFLG 526
            :     |.|||.|:.|:  ||:|.:::.:.:   |.:.::       ..|...::..::.:.|  
Zfish   181 E-----KEKKSVKQKRQ--KKNKLEEDSETSAGVPAKKSK-------VKGFELQFSSVKFEDF-- 229

  Fly   527 DKALTARIGTNPSPGDIRQILTEYCILPLGSDAIHNCTPLI---------RSILLAGPKGSGKKA 582
                          |...:.|.|.|.|     .||...|.:         |..||.||.|.||..
Zfish   230 --------------GGSDETLEEVCKL-----LIHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTL 275

  Fly   583 LLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKKIPK 647
            |..|:..|....|..::...:|....|:|        ..|:..|.:.|:     :..|.:..|.:
Zfish   276 LAQAVAGETALPLLKISAPELVSGVSGES--------EQKLRELFEQAI-----SSAPCILFIDE 327

  Fly   648 TDRTDPKR--LKKDLPKLI-----------KNIAPEDRVVFIGTSNLPWEADQKLLQS-VYNRFI 698
            .|...|||  ..||:.:.|           .::....:|:.||.:|.|...|..|.:: .::|.|
Zfish   328 IDAITPKRETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREI 392

  Fly   699 YIPRPDYGAMSHAWKTL-----LHDYSGGISNLDTSAMAKISDGYTIGSIDA-CLKEVMTCKRKL 757
            .:..||.||.....|||     |.|      :.|...:|:::.||....:.| |.:..|....::
Zfish   393 CLGIPDEGARMKILKTLCRKIRLPD------DFDFRHLARLTPGYVGADLMALCREAAMNAVNRI 451

  Fly   758 QLR-------TQPLTNAELINVLCS 775
            .|.       |..|..|.|:::|.|
Zfish   452 LLEPTTEDQITPTLALARLLDLLKS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164 17/96 (18%)
SpoVK 443..773 CDD:440232 81/371 (22%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 43/180 (24%)
nvlNP_998649.1 Nucleolin_bd 2..71 CDD:465247 13/72 (18%)
CDC48 <218..796 CDD:273521 68/299 (23%)

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