DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and spast

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_998080.2 Gene:spast / 405851 ZFINID:ZDB-GENE-040426-2331 Length:570 Species:Danio rerio


Alignment Length:564 Identity:120/564 - (21%)
Similarity:209/564 - (37%) Gaps:137/564 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 LLAAMKIQKMWRGHTARRITRRRKMEEMILIGMLPPPPAVVKERAEKLE--------------KL 276
            ||..:.:...|.....||....|..|    .|     |...:|..|::.              ::
Zfish    42 LLRVLLLLLRWLFQPIRRAMAARAKE----CG-----PDGSEETGERIRNYHKQAFEFISVALQI 97

  Fly   277 QHNEK--RYQAQAFYGKEFEERQNALKEEIRAKHGASMKEDIADEIR-------AWVKDCYDKTG 332
            ..:||  :.:|..:|.|...|.:..::.::.   ||..|.|.|.:::       :..:|.....|
Zfish    98 DEDEKGDKQKAVQWYRKGIAELEKGIQIQVT---GAGEKADRARKLQDKMITNLSMAEDRLKLLG 159

  Fly   333 K-LPDFPSEDQG-GSLHIFS----RP----GTESEHSRSSARSSKESRKTKDKSKSPARSGDLNV 387
            . |...|:|... .|.:.||    ||    |..|:...:...:::.|.:.|:..||...:..|| 
Zfish   160 NLLSQSPAESSSDDSFYSFSNGNLRPAPASGAVSKKKDTLTITNQTSLRPKNPPKSTPNASGLN- 223

  Fly   388 NENQDEEVSFQPAPSVCLPDIRAEIDLFNDTWRDKDETGVLSQAAYEDMIYSDKYQEVELEFRRA 452
                            |.|..           .....||                          
Zfish   224 ----------------CTPSA-----------AQSSRTG-------------------------- 235

  Fly   453 VDDVMRQEIELLQTAVGK-KVKKSSKKTRRSGKKSKKKKEKDLTPDRTTESLYEELVTNGIIRKY 516
                 .|..:...|..|| .||.|:..|      :..::::|:...:..:|....|:.|.|:...
Zfish   236 -----PQNNQKGPTVKGKNNVKASTTAT------ASPQRKRDMKNFKNVDSKLASLILNEIVDSG 289

  Fly   517 PELRLKQFLG-DKALTARIGTNPSPGDIRQILTEYCILP-LGSDAIHNCTPLIRSILLAGPKGSG 579
            ..:|.....| |.|              :|.|.|..||| |..:.........|.:||.||.|:|
Zfish   290 SVVRFDDIAGQDLA--------------KQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNG 340

  Fly   580 KKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKK 644
            |..|..|:..|..|..|:::.|.:..||.|:..  .|:..:..|:|.|||::||:.:.:....::
Zfish   341 KTMLAKAVAMESNATFFNISAATLTSKYVGEGE--KLVRALFAVARELQPSIIFIDEIDSLLCER 403

  Fly   645 IPKTDRTDPKRLKKDLPKLIK----NIAPEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDY 705
             .:.:....:|||.:.  ||:    ....::||:.:|.:|.|.|.|:.:|:....| ||:..|..
Zfish   404 -REGEHDASRRLKTEF--LIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKR-IYVALPTE 464

  Fly   706 GAMSHAWKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDACLKE 749
            .......|.||..:...:|..:.|.:|:::|||:...:.:..|:
Zfish   465 ETRLKLLKNLLSKHRNPLSQKELSQLARLTDGYSGSDLTSLAKD 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164 17/96 (18%)
SpoVK 443..773 CDD:440232 76/314 (24%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 47/162 (29%)
spastNP_998080.2 MIT_spastin 80..158 CDD:239142 12/80 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..269 21/147 (14%)
RecA-like_spastin 296..459 CDD:410932 50/182 (27%)
AAA_lid_3 486..534 CDD:465537 6/23 (26%)
Vps4_C <532..565 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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