DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and Spast

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_008762708.1 Gene:Spast / 362700 RGDID:1308494 Length:614 Species:Rattus norvegicus


Alignment Length:343 Identity:84/343 - (24%)
Similarity:154/343 - (44%) Gaps:51/343 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 KSSKKTRRSGKKSKK----KKEKDLTPDRTTES-----LYEELVTNGIIRKYPELRLKQFLGDKA 529
            |.:.|..|:.|.|..    :|:|||...|..:|     :..|:|.||...|:.::..::.     
  Rat   288 KGTSKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQEL----- 347

  Fly   530 LTARIGTNPSPGDIRQILTEYCILP-LGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGA 593
                         .:|.|.|..||| |..:.........|.:||.||.|:||..|..|:..|..|
  Rat   348 -------------AKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNA 399

  Fly   594 VLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRLLQPAVIFMGDAERPFMKKIPKTDRTDPKRLKK 658
            ..|:::.|::..||.|:..  .|:..:..|:|.|||::||:.:.:....:: .:.:....:|||.
  Rat   400 TFFNISAASLTSKYVGEGE--KLVRALFAVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKT 461

  Fly   659 DLPKLIK----NIAPEDRVVFIGTSNLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDY 719
            :.  ||:    ..|.:|||:.:|.:|.|.|.|:.:|:....| :|:..|:........|.||...
  Rat   462 EF--LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKR-VYVSLPNEETRLLLLKNLLCKQ 523

  Fly   720 SGGISNLDTSAMAKISDGYTIGSIDACLKEVMTCKRKLQLRTQPLTN---AELINVLCS------ 775
            ...::..:.:.:|:::|||:...:.|..|:......: :|:.:.:.|   :|:.|:..|      
  Rat   524 GSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR-ELKPEQVKNMSASEMRNIRLSDFTESL 587

  Fly   776 ---RDPVYREEEEAFESW 790
               :..|..:..||:..|
  Rat   588 KKIKRSVSPQTLEAYIRW 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 79/315 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 48/162 (30%)
SpastXP_008762708.1 MIT_spastin 114..193 CDD:239142
RecA-like_spastin 341..504 CDD:410932 48/186 (26%)
AAA_lid_3 531..585 CDD:465537 11/54 (20%)
Vps4_C <578..610 CDD:462762 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.

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