DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16789 and CG4701

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_609721.1 Gene:CG4701 / 34858 FlyBaseID:FBgn0028868 Length:384 Species:Drosophila melanogaster


Alignment Length:348 Identity:79/348 - (22%)
Similarity:139/348 - (39%) Gaps:70/348 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 GIIRKYPELRLKQFLGDKALTARIGTNPSPGDIR-----------QILTEYCILPLGSDAIHNCT 564
            |..:|:   |.:.|...:.:.|.....|...||.           |.|.|..:||:....:.:.:
  Fly    63 GAAKKF---RARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRS 124

  Fly   565 PLIRS---ILLAGPKGSGKKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIMLIHLVLKVSRL 626
            .|.|:   :||.||.|.||..:..||..:.|....:|....:..|:.|:|.  .|...|..:::.
  Fly   125 KLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQ--KLATAVFTLAKK 187

  Fly   627 LQPAVIFMGDAERPFMKKIPKTDRTDPKRLKKDLPKLIK--------NIAPEDRVVFIGTSNLPW 683
            |||.:||:.:.| .|::.....|......:|...  :::        ||.    |:.:|.:|.|.
  Fly   188 LQPCIIFIDEIE-SFLRMRGSNDHEATAMIKTQF--MLQWDGLMSNTNIC----VLVLGATNRPQ 245

  Fly   684 EADQKLLQSVYNRF-IYIPRPDYGAMSHAWKTLLHDYSGGISNLDTSAMAKISDGYTIGSIDACL 747
            :.|:.:|:.:..:| |.:||.  .......:.:|.     ...|..|...|.....|||...:.|
  Fly   246 DLDKAILRRMPAQFHIGVPRD--CQRREILQLILQ-----TEQLSPSVNLKELARLTIGFSGSDL 303

  Fly   748 KEVMTCK-----RKLQLRTQPLTNAELINVLCSRDPV---YREEEEAFESWWSKTPLGRRRQRFL 804
            :|:  |:     |..|...:.|...|.|    .:|.:   :..:::|.:.|           ..|
  Fly   304 REL--CRHASMYRMRQFMREKLNTGEEI----GKDKIEWDFEVKDQALQEW-----------EHL 351

  Fly   805 ELEEERLLEEQA--QAAK-QGNG 824
            |::.|.||:..:  :|:| |..|
  Fly   352 EIQMEDLLKSLSVMKASKHQAQG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164
SpoVK 443..773 CDD:440232 67/289 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 44/180 (24%)
CG4701NP_609721.1 CDC48 <21..368 CDD:273521 75/340 (22%)
RecA-like_ATAD1 96..261 CDD:410928 41/173 (24%)
Blue background indicates that the domain is not in the aligned region.

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