DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16789 and Iqca1

DIOPT Version :10

Sequence 1:NP_649910.3 Gene:CG16789 / 41154 FlyBaseID:FBgn0037712 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001418200.1 Gene:Iqca1 / 316616 RGDID:1305311 Length:836 Species:Rattus norvegicus


Alignment Length:865 Identity:328/865 - (37%)
Similarity:538/865 - (62%) Gaps:67/865 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSTYFNDIWHQSQHECELLSTIDYERQHQDVETTVATMNAAVGSVAADADAKALLQSSLYEFYL 65
            ||:..:|::|||:|.  .|.|.:|.|.|    :.|....|            |.|:...|..||:
  Rat     1 MSNLMYNNMWHQTQE--ALNSLLDKESQ----KMTEPQKN------------KVLVFQMLATFYI 47

  Fly    66 RYICLSNRLEDVYDNMIQPQKRQLVRKLLDACLGRVVELKHDLVNIDLMEFSYNDEVVERLRLTP 130
            :|:.:...:|:|||.::.||||.|:||:||..:||::|||:::|.:::.||.|.|::::.::|:|
  Rat    48 KYVQIFRNMENVYDQIVHPQKRMLIRKILDGVMGRILELKNEMVELEMTEFHYFDDILQDMKLSP 112

  Fly   131 METELRIPRYFLRERQQELEFRKKTMHEILTKLGWLEEHELE---ETVTTEIEAIRMLQMHERAR 192
            .:.::.||||||:||.:.::.|:||:..||.:.| |...:::   :::..| ||::|:|:.||||
  Rat   113 QQLDVPIPRYFLKERLEVIKGREKTLARILDECG-LNLPDVKYAVKSIALE-EAVKMIQIAERAR 175

  Fly   193 QGRLRAHFMKEIRILKEKGKSEERTEKERSDSGLLAAMKIQKMWRGHTARRITRRRKMEEMILIG 257
            ||||||.|||:|.:.:.:.:..:....:.||: .|||::|||:|||....:.|.:.:.|||:.:|
  Rat   176 QGRLRAMFMKQIFLQECRAREMKLLGHKLSDT-TLAALQIQKVWRGFYQCKKTVKEREEEMVFLG 239

  Fly   258 MLPPP------PAVVKERAEKLEKLQHNEKRYQAQAFYGKEFEERQNALKEEIRAKHGASMKEDI 316
            |.|||      .|:|  ::|::..|     |.:.|..:.::::|...::||::|...||.:||.:
  Rat   240 MKPPPLFNEVSDAIV--QSEQVSNL-----RDELQLKHEQKYQEALVSIKEDLRLLEGADIKEHL 297

  Fly   317 ADEIRAWVKDCYDKTGKLPDFPSEDQGGSLHIFSRP----------GTESEHSRSSARSSKESRK 371
            .|:||.|..:|.:.||..|::|:|::|||..|||..          ..:.|..:|..:..||.::
  Rat   298 QDQIRQWFIECRNLTGTFPEYPNEEEGGSAVIFSNKTPEQVIEDIIAAQEEEEKSKKKKKKEEKE 362

  Fly   372 TKDK--SKSPARSGDLNVNENQDEEVSFQPAPSVCLPDIRAEIDLFNDTWRDKDETGVLSQAAYE 434
            .|.|  .|...|.........::|:..::.:||:.|..:.....|:.|.|.:|||:....|....
  Rat   363 NKGKKVKKEKERKTVTKEKAAKEEDEEWKMSPSLFLQLMEEGNSLYKDMWMNKDESWNFPQDYDP 427

  Fly   435 DMIYSDKYQEVELEFRRAVDDVMRQEIELLQTAVGKKV------KKSSKKTR-RSGKKSKK-KKE 491
            :::..:|.:|:|:|.|..||::||||::.|:.||.:::      ||..|:.: |.|::.|: ||:
  Rat   428 ELVKEEKRKELEMEIRVQVDELMRQELKNLKLAVNREIEPQPRLKKGKKQNKGRKGRRGKRGKKD 492

  Fly   492 KDLTPDRTTESLYEELVTNGIIRKYPELRLKQFLGDKALTA----RIGTNPSPG--DIRQILTEY 550
            ||||.|||.||||:|||..|::.:..:::|..::|:.:...    ::...|.|.  |:||::|.|
  Rat   493 KDLTADRTIESLYQELVEEGLLIQALKVKLSDYIGEYSYLGTTLRQVAIEPMPSLLDVRQLITLY 557

  Fly   551 CILPLGSDAIHNCTPLIRSILLAGPKGSGKKALLHAICTEVGAVLFDLTPANIVGKYPGKSGLIM 615
            .||||||..:|...||::|:|||||.|.|||.|:||||||.||.||:|:.:||.||||||:||.|
  Rat   558 GILPLGSAEVHERAPLVKSLLLAGPPGVGKKMLVHAICTETGANLFNLSSSNIAGKYPGKTGLQM 622

  Fly   616 LIHLVLKVSRLLQPAVIFMGDAERPFMKKIPKTD-RTDPKRLKKDLPKLIKNIAPEDRVVFIGTS 679
            :||||.||:|.|||:|:::.|.|:.|.||:|:.: |.:||||||.||||:|.:.|:||::.:||:
  Rat   623 MIHLVFKVARQLQPSVVWIQDTEKTFYKKVPQAEKRNEPKRLKKYLPKLLKLLRPDDRILIVGTT 687

  Fly   680 NLPWEADQKLLQSVYNRFIYIPRPDYGAMSHAWKTLLHDYSGGISN-LDTSAMAKISDGYTIGSI 743
            :.|::|:.:....||.:.|.:|||||.:....||.::....|.::| |:.|.::|::||:|.|.|
  Rat   688 HRPFDAELQSFCRVYQKIILVPRPDYASRYVLWKQIILRNGGEVTNALNISCLSKVTDGFTQGQI 752

  Fly   744 DACLKEVMTCKRKLQLRTQPLTNAELINVLCSRDPVYREEEEAFESWWSKTPLGRRRQRFLELEE 808
            ...:|||:|.:|..|...:|||..|.|.::.:.:||||||||:|::|::||||||:  |.|.|..
  Rat   753 VHVIKEVLTERRIRQQAHKPLTAIEFITMMTNMNPVYREEEESFKNWYAKTPLGRK--RVLSLTV 815

  Fly   809 ERLLEEQAQAAKQGNGNKKK 828
            ....|::....|:|...|||
  Rat   816 GGGKEKEKDKGKKGKKGKKK 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16789NP_649910.3 DUF5401 <131..>307 CDD:375164 64/184 (35%)
SpoVK 443..773 CDD:440232 154/345 (45%)
P-loop containing Nucleoside Triphosphate Hydrolases 542..700 CDD:476819 86/158 (54%)
Iqca1NP_001418200.1 CDC48 <420..758 CDD:273521 145/337 (43%)
P-loop containing Nucleoside Triphosphate Hydrolases 549..708 CDD:476819 86/158 (54%)

Return to query results.
Submit another query.