DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and SEC1

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_010448.1 Gene:SEC1 / 851742 SGDID:S000002571 Length:724 Species:Saccharomyces cerevisiae


Alignment Length:664 Identity:140/664 - (21%)
Similarity:253/664 - (38%) Gaps:177/664 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDS----GRSNERLKYLKCIVFIRPTK 77
            |:...:|.:::||...:|:|..|.....|...|...:.:||    |:|:     ::.|..:.|||
Yeast    20 ETKNNLKFLIIDKTVETILSYLFLTPQELLNNVTSVDLIDSPTRKGQSS-----IEAIYILEPTK 79

  Fly    78 QNIQLLANE--LRNPKYSAYYIYF----SNIIPR--TDIKYLAECDESESVRE----VKE-LYAD 129
            .||..:..:  :|.|||...:|.|    :|.|.:  ...:|:|:..||....|    ||| .:.:
Yeast    80 YNINCIDADFMVRPPKYRRCHIRFLPGLTNPIFQFFQSKRYIAQNLESFKPIELGFFVKESQFFE 144

  Fly   130 YLCVNPNLFSLGIPNCMANLNWLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAK---- 190
            .|.:..:|......||.|   .:|..:.:.:..:.::.:.....|::||...:...:..|:    
Yeast   145 TLQMEHSLQVFFNNNCKA---LIPTNVRKIVGSLVSLCVITGEYPIVRYSVSNPVEEEDARNGNA 206

  Fly   191 -LIYEQITKE-SSLFDF------RSNMDGAAPP--------LLLVLDRRDDPVTPLLHQWTYQAM 239
             :....:|:. ::.|..      |:|.|  .||        :|::.||..||..|:||.::||||
Yeast   207 VVNANSLTRSIANAFQIAIDTYARNNPD--FPPQNTERPRSILIITDRTLDPFAPILHDFSYQAM 269

  Fly   240 VHELLHIKNNRLDLSNCPNVPKDFKELVLSGDQD-------DFYGNN---------MYAN-YGEI 287
            .::|:...:.:.|:.:       :.....:|:|:       |.|..:         |.|| |  |
Yeast   270 AYDLVANVDTQKDIYH-------YSAENEAGEQEEKVSKLVDLYDPDWIDLKHQHIMDANEY--I 325

  Fly   288 GSTIKQLMEEFQRKAN----DHKKVESIADMKNFIESYPQFKKMSGTVQKHLCVIGELSALSNKR 348
            ...||:|:.:     |    |...|::..|:.:.:.....|.:....:..|..::.|....:.:|
Yeast   326 QGRIKELIAK-----NPLLVDRSNVKNTTDLLSVVAHLKDFDEERRRLILHKTLVDECLGENAER 385

  Fly   349 NLFEVSELEQEIA-CKAEHSAQLQRIKKLIAD-------ERVSIDDALKLVALYALRYERHANCD 405
            .|.::|.:||.:: ...:.|.  ::||.:|.|       :..:|.|.|:.:..|||         
Yeast   386 KLADISAIEQNLSGFGMDFSG--EKIKHIIDDLLPALAMKEPTILDKLRYIIAYAL--------- 439

  Fly   406 TSGLLQIIKTRGGRAAIVP----SLIEYAG-TH-----------VRQGDLFNMVRITDAVK---- 450
                     .|||   |:.    .|:.:.| ||           .|..||.:...|.|..|    
Yeast   440 ---------FRGG---IIELDFIKLLNFIGVTHEHENFQQYLKIFRNYDLIDFKLIKDKPKDKPF 492

  Fly   451 ----LTRNLI---------KGLKGVENVFT-----------QHTPLLKETLEDVFKGREL----- 486
                ....|:         :.:..|.|:.:           |:.|.||:...::....|.     
Yeast   493 QKEWFHDTLVNDPNIYHTSRFVPAVGNILSKVIANPLLLSEQYFPYLKDKPIELLNEEEFQAGLA 557

  Fly   487 -----------DPLFPA---INSELVPFRRPPQEVVVFIIGGATYEEALAVH-QLNNAGYKVILG 536
                       :|...|   ..|..:....|.|....::|||.:..|..|.: |.|.....:.:|
Yeast   558 NTSANSSSSLRNPRHKAAWTTKSSNIKKNIPRQRFFYYVIGGISIPEIKAAYDQSNLKNRDIFIG 622

  Fly   537 GTTIHNSQSFIQEV 550
            ...|.....|:.||
Yeast   623 SDEILTPTKFLDEV 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 136/649 (21%)
SEC1NP_010448.1 SEC1 1..644 CDD:227487 140/664 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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