DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and stxbp1

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001072521.1 Gene:stxbp1 / 779976 XenbaseID:XB-GENE-945143 Length:604 Species:Xenopus tropicalis


Alignment Length:590 Identity:120/590 - (20%)
Similarity:257/590 - (43%) Gaps:97/590 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANEL 87
            |::::|:.:..::|.....:|::...:.:.|  |..:..|.:..|:.:..|.|:::::..|.::.
 Frog    29 KVLVVDQLSMRMLSSCCKMTDIMTEGITIVE--DINKRREPIPSLEAVYLITPSEKSVHSLISDF 91

  Fly    88 RNP---KYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADYLCVNPNLFSLGIPNCMANL 149
            ::|   ||.|.:::|::..|.|....|.:...|:.::.:.|:...:|.....:|||..|:...:.
 Frog    92 KDPPSSKYRAAHVFFTDSCPDTLFNELVKSRTSKMIKTLTEINIAFLPYESQVFSLDYPDSFHSF 156

  Fly   150 NWLP-------DALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQITKESSLFDFRS 207
             :.|       ..|.|..:.|..:..:||..|.:|||...:...:|::||.:::....:......
 Frog   157 -YSPHKAQMKNPILERLAEQIATLCATLKEYPAVRYRGDYKDNAMLSQLIQDKLDAYKADDPTMG 220

  Fly   208 NMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVPKDFKELVLSGDQ 272
            .....|...|::|||..||.:|:||:.|:|||.::||.::|:...........:..||::|..| 
 Frog   221 EGPDKARSQLIILDRGFDPASPILHELTFQAMSYDLLPVENDVYKYETSGIGDQRMKEVLLDED- 284

  Fly   273 DDFYGNNMYANYGEIGSTIKQLMEEF--QRKANDHKKVESIADMKNFIESYPQFKKMSGTVQKHL 335
            ||.:....:.:..|:...:.:.:::|  .::.|...||.::.|:...::..||::|         
 Frog   285 DDLWVTLRHKHIAEVSQEVTRSLKDFSASKRMNTGDKVTTMRDLSQMLKKMPQYQK--------- 340

  Fly   336 CVIGELSALSNKRNLFE------------VSELEQEIACKAEHSAQ-----LQRIKKLIADERVS 383
                |||..|...:|.|            :..:||::|...:...:     ::.|..::.|..||
 Frog   341 ----ELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDGNVS 401

  Fly   384 IDDALKLVALYALRYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLF-NMVR--- 444
            ..|.::::.||                 |....|.....:..||::|.......::. ||..   
 Frog   402 TYDKIRIINLY-----------------IFLKNGITEENLNKLIQHAQIPPEDSEIITNMAHLGV 449

  Fly   445 --ITDAVKLTRNLIKGLKGV-ENVF--TQHTPLLKETLEDVFKGRELDPLFPAI----------- 493
              |||:....|:.....:.: |..:  ::.||::|:.:||....:.....:|.|           
 Frog   450 PIITDSTLRRRSKPDRKERISEQTYQLSRWTPVVKDIMEDTIDDKLDTKHYPYISTRSSASFSTT 514

  Fly   494 -----------NSELVPFRRPPQEVVVFIIGGATYEEALAVHQLN--NAGYKVILGGTTIHNSQS 545
                       |.....:|..|: :::||:||....|....::::  |..::|::|.|.|.....
 Frog   515 AVSARYGHWHKNKAPGEYRAGPR-LIIFILGGVALSEMRCAYEVSQANGKWEVLIGSTHILTPTK 578

  Fly   546 FIQEV 550
            |::::
 Frog   579 FLEDL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 119/581 (20%)
stxbp1NP_001072521.1 Sec1 29..576 CDD:366407 119/581 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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