DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and vps45

DIOPT Version :10

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001072504.1 Gene:vps45 / 779959 XenbaseID:XB-GENE-961682 Length:570 Species:Xenopus tropicalis


Alignment Length:578 Identity:302/578 - (52%)
Similarity:418/578 - (72%) Gaps:20/578 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLK 65
            ||::..:|.|:.||..:||||||::|:||||||::||.::||::||:|||||||:|| .:.|.:|
 Frog     1 MNVVLAVKQYVSKMIEDSGPGMKVLLMDKETTSVVSMVYTQSEILQKEVYLFERIDS-TNRESMK 64

  Fly    66 YLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADY 130
            :||.|.|:||||:|::.|..|||.||||.|::||||:|.::|:|.|||.||.|.|.||:|.|.||
 Frog    65 HLKAICFLRPTKENVEYLIKELRRPKYSVYFLYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDY 129

  Fly   131 LCVNPNLFSLGIPNCMANLNWLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQ 195
            :.|||::|||.|..|....||....|.|:.||:||:|||||..|:|||:..|..|:.||:.:.:.
 Frog   130 IAVNPHVFSLNIVGCYQGRNWDAVHLYRTTQGLTALLLSLKKCPMIRYQLSSDMAKRLAEGVKQV 194

  Fly   196 ITKESSLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVP 260
            ||||..||:||..   ..|||||:|||.||.:||||:||||||||||:|.|.|||:|||..|.:.
 Frog   195 ITKEYELFEFRRT---EVPPLLLILDRSDDAITPLLNQWTYQAMVHEMLGINNNRIDLSRVPGIS 256

  Fly   261 KDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQ-RKANDHKKVESIADMKNFIESYPQF 324
            ||.||:|||.:.|:||.||||.|:||||:.||.|||:|| :|....:|:|||:|||.|:|:||||
 Frog   257 KDLKEVVLSAENDEFYANNMYLNFGEIGTNIKNLMEDFQKKKPKGQQKLESISDMKAFVENYPQF 321

  Fly   325 KKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSAQLQRIKKLIADERVSIDDALK 389
            |||||||.||:.|:||||.|.::|:|.||||:|||:||:.:||..||.:|:|:.::|::..||.:
 Frog   322 KKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQNDHSNALQNVKRLLQNQRLAELDATR 386

  Fly   390 LVALYALRYERHANCDTSGLLQIIKTRG---GRAAIVPSLIEYAGTHVRQGDLFNMVRITDAVKL 451
            ||.||||.||||::...|.||..::.||   ....:|.:::||.|..||..|||:.   .|||.:
 Frog   387 LVMLYALHYERHSSNALSSLLNDLRVRGVSEKYRRLVSAVVEYGGKRVRGSDLFSP---KDAVAI 448

  Fly   452 TRNLIKGLKGVENVFTQHTPLLKETLEDVFKGRELDPLFPAINSELVPFRRPPQEVVVFIIGGAT 516
            |:...|||||||||:|||.|.|.:||:.:.||:..|.|:|.:....:  |..||:::||::||||
 Frog   449 TKQFFKGLKGVENVYTQHQPFLLDTLDQLIKGKLKDNLYPYLGPNTL--RDRPQDIIVFMVGGAT 511

  Fly   517 YEEALAVHQLNNA--GYKVILGGTTIHNSQSFIQEVVAA----TSGIQFK-HTKSMIK 567
            ||||.||:.||..  |.:::||||.|||::||::||.:|    .||..:: .:||.::
 Frog   512 YEEAFAVYNLNRTTPGVRIVLGGTAIHNTKSFLEEVQSAGFPGRSGESYQPASKSSVR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..549 CDD:460020 284/531 (53%)
vps45NP_001072504.1 Sec1 23..546 CDD:460020 284/531 (53%)

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