DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and VPS33A

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_075067.2 Gene:VPS33A / 65082 HGNCID:18179 Length:596 Species:Homo sapiens


Alignment Length:609 Identity:125/609 - (20%)
Similarity:249/609 - (40%) Gaps:103/609 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERL---KYLK 68
            ::.:::| |:    |.|.|:.|:..|....:....|.:.:.||   |::.:.:.| ||   ....
Human    23 LREFLDK-CA----GSKAIVWDEYLTGPFGLIAQYSLLKEHEV---EKMFTLKGN-RLPAADVKN 78

  Fly    69 CIVFIRPTKQNIQLLANEL-----RNPKYSAYYIYFSNIIPRTDI---KYLAECDESESVREVKE 125
            .|.|:||..:.:.::|..:     |.|... ::|.|   :||..:   :.|.:.....|....:|
Human    79 IIFFVRPRLELMDIIAENVLSEDRRGPTRD-FHILF---VPRRSLLCEQRLKDLGVLGSFIHREE 139

  Fly   126 LYADYLCVNPNLFSL----GIPNCMANLNWLPDALNRSMQGITAVLLSLKLNPVI--RYRAGSQA 184
            ...|.:..:.:|.|:    ....|.  |.....:|..:.:|:..:.......|.|  :.....|.
Human   140 YSLDLIPFDGDLLSMESEGAFKECY--LEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQV 202

  Fly   185 AQLLAKLIYEQITKESSLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNN 249
            |.::.::..|....::|:|....|        ||:|||..|.:|||..|.||:.::.|:..|:|:
Human   203 ANMMIRMKREFTGSQNSIFPVFDN--------LLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNS 259

  Fly   250 RLDL-----------SNCPNVPKDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQRKAN 303
            .:.|           ....::|.:.|:|.|: ..::.|......|:..:||.:.:..:.......
Human   260 YVKLPPEKFAPKKQGDGGKDLPTEAKKLQLN-SAEELYAEIRDKNFNAVGSVLSKKAKIISAAFE 323

  Fly   304 DHKKVESIADMKNFIESYPQFKKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSA 368
            :....:::.::|.|:...|..:...|::..|..:...:..::...:.|:...:|||.....:...
Human   324 ERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDK 388

  Fly   369 QLQRIKKLIADERVSIDDALKLVALYALRYERHANCDTSGLLQ---------IIKTRGGRAAIVP 424
            ....|:..|| ::.|:...|:||.|.::       |: |||.|         |::|.|....:..
Human   389 VNNYIEDCIA-QKHSLIKVLRLVCLQSV-------CN-SGLKQKVLDYYKREILQTYGYEHILTL 444

  Fly   425 SLIEYAGTHVRQ-GDLFNMVRITDAVKLTRNLI--KGLKGVENVFTQHTPL-------------- 472
            ..:|.||....| |...|...|...::|..:.:  :....:..|::.:.||              
Human   445 HNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWR 509

  Fly   473 -LKETLEDVFKG---RELDPLFPAINSELVPFRRPPQE---VVVFIIGGATYEEALAVH---QLN 527
             ::|.|. :..|   .|..||...:..     :|.|.|   .::|.:||.|:.|..|:.   ||.
Human   510 SIEEVLR-ILPGPHFEERQPLPTGLQK-----KRQPGENRVTLIFFLGGVTFAEIAALRFLSQLE 568

  Fly   528 NAGYKVILGGTTIHNSQSFIQEVV 551
            :.|.:.::..|.:.|..|:|:.::
Human   569 DGGTEYVIATTKLMNGTSWIEALM 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 119/583 (20%)
VPS33ANP_075067.2 Sec1 34..584 CDD:395791 119/583 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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