DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and stxbp1a

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_005161170.1 Gene:stxbp1a / 574003 ZFINID:ZDB-GENE-050626-106 Length:603 Species:Danio rerio


Alignment Length:595 Identity:129/595 - (21%)
Similarity:257/595 - (43%) Gaps:108/595 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANEL 87
            |.:::|:.:..::|.....:|::...:.:.|  |..:..|.|..|:.|..|.||.:::|.|.|:.
Zfish    29 KALIVDQLSMRMLSSCCKMTDIMTEGITIVE--DIMKRREPLPSLEAIYLITPTDKSVQTLINDF 91

  Fly    88 RNP---KYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADYLCVNPNLFSLGIPNCMANL 149
            ::|   ||...:::|::..|......:.:...|::::.:.|:...:|.....:|||..|:...:.
Zfish    92 KDPHSAKYKGAHVFFTDSCPDPLFNEVVKSRASKTIKTLNEINIAFLPYESQVFSLDNPDAFQSF 156

  Fly   150 NWLP-------DALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQITKESSLFDFRS 207
             :.|       ..:.|..:.:..:..:||..|.:|||...:....||:|:.:::....:......
Zfish   157 -YSPHKTQLKNPVMERLAEQLATLCATLKEYPAVRYRGEYKDNATLAQLLQDKLDAYKADDPTMG 220

  Fly   208 NMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNN--RLDLSNCPNVPKDFKELVLSG 270
            .....|...|::|||..|||:|:||:.|:|||.::||.|:|:  :.|.|...:..:  ||::|..
Zfish   221 EGPDKARSQLIILDRGFDPVSPVLHELTFQAMAYDLLPIENDVYKYDTSGIGDSRE--KEVLLHE 283

  Fly   271 DQDDFYGNNMYANYGEIGSTIKQLMEEF--QRKANDHKKVESIADMKNFIESYPQFKKMSGTVQK 333
            | ||.:....:.:..|:...:.:.::||  .::.|..:|. ::.|:...::..||::|       
Zfish   284 D-DDLWVALRHKHIAEVSQEVTRSLKEFSASKRMNTGEKT-TMRDLSQMLKKMPQYQK------- 339

  Fly   334 HLCVIGELSALSNKRNLFE------------VSELEQEIACKAEHSAQ-----LQRIKKLIADER 381
                  |||..|....|.|            :..:||::|...:...:     ::.|..::.|..
Zfish   340 ------ELSKYSTHLQLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDAN 398

  Fly   382 VSIDDALKLVALYALRYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLF-NMVR- 444
            |:..|.::::.||                 |....|.....:..||::|.......::. ||.. 
Zfish   399 VTTYDKIRIILLY-----------------IFLKNGITEENLNKLIQHAQIPPEDSEIITNMAHL 446

  Fly   445 ----ITDAVKLTRNLIKGLKGVENV------FTQHTPLLKETLEDVFKGRELDPLFPAI------ 493
                |||:. |.|.  |.:...|.|      .::.|||:|:.:||....:.....:|.|      
Zfish   447 GVPIITDST-LRRG--KKMDRKERVSEQTYQLSRWTPLIKDIMEDAIDDKLDTKHYPYISTRSSS 508

  Fly   494 ----------------NSELVPFRRPPQEVVVFIIGGATYEEALAVHQLN--NAGYKVILGGTTI 540
                            |.....:|..|: ::|||||||::.|....:::.  |..::.|:|.|..
Zfish   509 SFSTSAVSARYGHWHKNKTPGEYRTGPR-IMVFIIGGASFSEMRCAYEVTQANGKWEAIVGSTHS 572

  Fly   541 HNSQSFIQEV 550
            .....|:.::
Zfish   573 LTPTKFLMDL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 128/586 (22%)
stxbp1aXP_005161170.1 Sec1 29..575 CDD:279352 128/586 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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