DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and stxbp3

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001015972.1 Gene:stxbp3 / 548726 XenbaseID:XB-GENE-963836 Length:589 Species:Xenopus tropicalis


Alignment Length:597 Identity:135/597 - (22%)
Similarity:265/597 - (44%) Gaps:90/597 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIV 71
            ||..:...| ..|...||:|||..||.:::.....:|:||..:.:.|  |..:..:.::::|.|.
 Frog    17 IKTEVLDDC-RKGDEWKILLLDHFTTKLLTSCCKMTDLLQEGITVVE--DLFKKRQPVEHMKAIY 78

  Fly    72 FIRPTKQNIQLLANELRN---PKYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADYLCV 133
            ||.|.::::..|.|:..:   .||.|.|:|||::.|.:....|..| ..::::..||:...:...
 Frog    79 FISPNEKSVDCLVNDFNSKSASKYKAAYVYFSDVCPDSLFNKLKSC-HPKTIKRCKEISISFFPK 142

  Fly   134 NPNLFSLGIPNCMANLNWLPD-------ALNRSMQGITAVLLSLKLNPVIRYRAGS-QAAQLLAK 190
            ...:|.|.:|... :|.:.||       |:....|.|..:..:|:.||.:||:... ..|:.||.
 Frog   143 ESQVFLLNVPKAF-HLLYSPDKAVDKETAIQTIAQQIVTLCATLEENPGVRYKKEPLDNAEELAN 206

  Fly   191 LIYEQITKESSLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSN 255
            |:.||:.:...: |.:..........||::||..||.:.:||:.|:||||::||.|:|:......
 Frog   207 LVEEQLVQYYKM-DEKDQFKAKTQSQLLIVDRGFDPFSTILHELTFQAMVYDLLPIENDIYKYRT 270

  Fly   256 CPNVPKDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQRKANDHKKVESIADMKNFIES 320
            ...:.|| ||..|. :.|:.:....:.:...:...|.:|::|......:.:...||:.:.:.::.
 Frog   271 ESALAKD-KEARLD-ESDELWVKIRHKHIANVLEEIPKLVKEISSSKKETEGNISISKLADIMKK 333

  Fly   321 YPQFKKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSAQLQRIK---KLIADERV 382
            .|..:|..|....||. :.|......:..|.::.:.||::|..::  |:.|::|   :::....:
 Frog   334 MPHIRKQIGKQTLHLS-LAEDCMQKFRGRLEKLCKAEQDLALGSD--AEGQKVKDHMRVLLPILI 395

  Fly   383 SID----DALKLVALYALRYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDL---F 440
            |.|    |.::.:.||.......:..:...|:...|..||                  ||:   :
 Frog   396 SNDLDNYDKIRAILLYIFVENGTSQENLDRLITHAKIEGG------------------GDVLKNW 442

  Fly   441 NMVRITDAVKLT-RNLIKGLKGVENVF--TQHTPLLKETLEDVFKGRELDPLFPAINSELVPF-- 500
            ..:.:....|.| |...:..:..|..|  ::.||::|:.:||..:.:        ::|:..|:  
 Frog   443 KYLGVPIVPKSTQRRPARRDRSKEETFQLSRWTPIIKDVIEDTMENK--------LDSKEWPYCS 499

  Fly   501 -------------------------RRPPQEVVVFIIGGATYEEALAVHQLNNAG--YKVILGGT 538
                                     |:....:::|:|||.||.|....::::.|.  .:||:|.|
 Frog   500 ECPAAWNGSGAVSARQKHNTISRDERKNVSRLIIFVIGGITYSEIRCAYEVSQANKFVQVIIGST 564

  Fly   539 TIHNSQSFIQEV 550
            .|...::.:.:|
 Frog   565 HIITPKTMLDDV 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 130/572 (23%)
stxbp3NP_001015972.1 Sec1 32..569 CDD:366407 130/572 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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