DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and stxbp3

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_009294850.1 Gene:stxbp3 / 406780 ZFINID:ZDB-GENE-040426-2833 Length:593 Species:Danio rerio


Alignment Length:588 Identity:127/588 - (21%)
Similarity:258/588 - (43%) Gaps:103/588 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANELR 88
            |::||..||.::|.....||::...:.:.|.|...|  |.:..:|.|.|:.||.:.|....|:.:
Zfish    30 ILILDDFTTRLLSSCCKMSDLMSEGISVLENLFKNR--EPVPDMKAIYFMAPTVECIDAFINDFK 92

  Fly    89 -NPKYSAYYIYFSNIIP-RTDIKYLAECDESESVREVKELYADYL--------CVNPNLFSLGIP 143
             .|||.|.|::|::..| ....|....|  ::.:::.||:...:|        |.||..|.....
Zfish    93 PKPKYKAAYVFFTDYCPDELFDKMKKNC--AKHIKKCKEINISFLPQEAQVFTCENPEAFKKIYS 155

  Fly   144 NCMANLNWLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQA--AQLLAKLIYEQITKESSLFDFR 206
            ....:..   ..|::....|..:..:|...|.:||:..|..  .::||:|:..::.:...|.:..
Zfish   156 GFSQDRE---KTLDKIADQIVTLCATLDEYPGVRYKRESTPGYGKMLAELVDNKLARHYELDEIT 217

  Fly   207 SNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVPKD--FKELVLS 269
            :..: ..|..||::||..|||:|:||:.|||||.::|:.|.||..:..     .||  .||.:|:
Zfish   218 TKKE-KTPAQLLIVDRAMDPVSPILHELTYQAMAYDLIPINNNIYEYK-----MKDGSKKEALLN 276

  Fly   270 GDQDDFYGNNMYANYGEIGSTIKQLMEEFQRKANDHKKVE---SIADMKNFIESYPQFKKM--SG 329
            .| |:.:....:.:..|:...|.:|:::.....::.::.:   :|..:...::..|.|:|.  ..
Zfish   277 ED-DELWVKLRHRHIAEVTEQIPKLVKDISASRDEKQQGDGKITIGALSQLMKKMPAFRKQVTQK 340

  Fly   330 TVQKHLC--VIGELSALSNKRNLFEVSELEQEIACKAEHSAQLQRIKKLIADERVSIDDALKLVA 392
            ||..||.  ::|..     ::|:.::.:.||::|..|:  |:.|::|           |.::  .
Zfish   341 TVHLHLAEDLMGHY-----QKNVEKLCKAEQDLAVGAD--AEGQKVK-----------DPMR--T 385

  Fly   393 LYALRYERHANCD--TSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLFNM----VRITDAVKL 451
            |..:...:|...|  .:.||.|....|.....:..||:......:.|.:.|.    |.|..:...
Zfish   386 LLPVLLHQHDTTDKIRAVLLYIFSLNGTTTENLNKLIQNVKIEDKDGYIQNWNQLGVPILSSSNS 450

  Fly   452 TRNLIKGLKGVENVF--TQHTPLLKETLEDVFKGRELDPLFPAINSELVPFR------------- 501
            :|.:.:..:..:..:  ::.||::|:.:||..:.:        ::.:..||:             
Zfish   451 SRKVARRDRSEQETYNVSRWTPVIKDIMEDAVENK--------LDIKDWPFQSECPSAWNGSRAV 507

  Fly   502 -----------------RPPQEVVVFIIGGATYEEALAVHQLNNA--GYKVILGGTTIHNSQSFI 547
                             :....:::|::||.:|.|....:::.|.  ..:||:|.|.|...:|.:
Zfish   508 RVLSARQKHKGSSPGDMKNGSRLIIFVLGGVSYSEMRCAYEVTNTNKSCEVIIGSTHILTPRSLL 572

  Fly   548 QEV 550
            :::
Zfish   573 EDI 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 126/579 (22%)
stxbp3XP_009294850.1 Sec1 30..568 CDD:279352 126/579 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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