DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps45 and Vps45

DIOPT Version :10

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_038869.1 Gene:Vps45 / 22365 MGIID:891965 Length:570 Species:Mus musculus


Alignment Length:570 Identity:309/570 - (54%)
Similarity:423/570 - (74%) Gaps:20/570 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLK 65
            ||::..:|.||.||..:||||||::|:|||||.|:||.::||::||:|||||||:|| ::.|.:|
Mouse     1 MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDS-QNREIMK 64

  Fly    66 YLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADY 130
            :||.|.|:||||:|::.|..|||.||||.|:|||||:|.::|:|.|||.||.|.|.||:|.|.||
Mouse    65 HLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDY 129

  Fly   131 LCVNPNLFSLGIPNCMANLNWLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQ 195
            :.|||:||||.|..|....||.|..|:|:.||:||:|||||..|:|||:..|:||:.|.:.:.:.
Mouse   130 IAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLGECVKQV 194

  Fly   196 ITKESSLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVP 260
            |:||..||:||..   ..|||||:|||.||.:||||:||||||||||||.|.|||:|||..|.:.
Mouse   195 ISKEYELFEFRRT---EVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGIS 256

  Fly   261 KDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQRK-ANDHKKVESIADMKNFIESYPQF 324
            ||.:|:|||.:.|:||.||||.|:.||||.||.|||:||:| ..:.:|:|||||||.|:|:||||
Mouse   257 KDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKRPKEQQKLESIADMKAFVENYPQF 321

  Fly   325 KKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSAQLQRIKKLIADERVSIDDALK 389
            |||||||.||:.|:||||.|.::|||.||||:|||:||:.:||:.||.:|:|:.:.:|:..||::
Mouse   322 KKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQNVKRLLQNPKVTEFDAVR 386

  Fly   390 LVALYALRYERHANCDTSGLLQIIKTRG---GRAAIVPSLIEYAGTHVRQGDLFNMVRITDAVKL 451
            ||.||||.||||::....||:..::::|   ....:|.:::||.|..||..|||:.   .|||.:
Mouse   387 LVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYRKLVSAVVEYGGKRVRGSDLFSP---KDAVAI 448

  Fly   452 TRNLIKGLKGVENVFTQHTPLLKETLEDVFKGRELDPLFPAINSELVPFRRPPQEVVVFIIGGAT 516
            |:..:|||||||||:|||.|.|.|||:.:.|||..:.|:|.:....:  |..||:::||||||||
Mouse   449 TKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTL--RDRPQDIIVFIIGGAT 511

  Fly   517 YEEALAVHQLNNA--GYKVILGGTTIHNSQSFIQEVVAATSGIQFKHTKS 564
            |||||.|:.||..  |.:::||||||||::||::||:|  ||:   |::|
Mouse   512 YEEALTVYNLNRTTPGVRIVLGGTTIHNTKSFLEEVLA--SGL---HSRS 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..549 CDD:460020 290/531 (55%)
Vps45NP_038869.1 Sec1 23..546 CDD:460020 288/528 (55%)

Return to query results.
Submit another query.