DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and Stxbp3

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_035634.1 Gene:Stxbp3 / 20912 MGIID:107362 Length:592 Species:Mus musculus


Alignment Length:612 Identity:160/612 - (26%)
Similarity:273/612 - (44%) Gaps:120/612 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIV 71
            ||..:...|.:.|. .||:|||:.||.::|.....:|:|:..:.:.|.:...|  |.::.:|.:.
Mouse    18 IKTAVFDDCRKEGE-WKIMLLDEFTTKLLSSCCKMTDLLEEGITVIENIYKNR--EPVRQMKALY 79

  Fly    72 FIRPTKQNIQLLANEL---RNPKYSAYYIYFSNIIPRTDI-KYLAECDESESVREVKELYADYLC 132
            ||.||.:::.....:.   ...||.|.||||::..|.:.. |..|.|  |:|:|..||:...::.
Mouse    80 FISPTPKSVDCFLRDFGSKSEKKYKAAYIYFTDFCPDSLFNKIKASC--SKSIRRCKEINISFIP 142

  Fly   133 VNPNLFSLGIPN----CMANLNWLPDALNRS---------MQGITAVLLSLKLNPVIRYRA---- 180
            ....:::|.:|:    |     :.||..|.|         .:.|..|..:|..||.:||::    
Mouse   143 QESQVYTLDVPDAFYYC-----YSPDPSNASRKEVVMEAMAEQIVTVCATLDENPGVRYKSKPLD 202

  Fly   181 -GSQAAQLLAKLI--YEQITKESSLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHE 242
             .|:.|||:.|.:  |.:|       |.:..:.|.....||::||..|||:.:||:.|:|||.::
Mouse   203 NASKLAQLVEKKLEDYYKI-------DEKGLIKGKTQSQLLIIDRGFDPVSTVLHELTFQAMAYD 260

  Fly   243 LLHIKNNRLDLSNCPNVPKDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQ--RKANDH 305
            ||.|:|   |........|: ||.||..| ||.:....:.:...:...|.:||:|..  :||.:.
Mouse   261 LLPIEN---DTYKYKTDGKE-KEAVLEED-DDLWVRVRHRHIAVVLEEIPKLMKEISSTKKATEG 320

  Fly   306 KKVESIADMKNFIESYPQFKKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSAQL 370
            |  .|::.:...::..|.|:|.......|| .:.|......|.|:.::.:.||::|...:  |:.
Mouse   321 K--TSLSALTQLMKKMPHFRKQISKQVVHL-NLAEDCMNKFKLNIEKLCKTEQDLALGTD--AEG 380

  Fly   371 QRIKKLIADERVSIDDALKLVALYALRYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVR 435
            ||:|           |:: ||.|..|..:.|.|||        |.|    |::..:....||...
Mouse   381 QRVK-----------DSM-LVLLPVLLNKNHDNCD--------KIR----AVLLYIFGINGTTEE 421

  Fly   436 QGD-LFNMVRITDAVKLTRNL----------------IKGLKGVENVF--TQHTPLLKETLEDVF 481
            ..| |.:.|:|.|...:.||.                ::..:..|..|  ::.||.:|:.:||..
Mouse   422 NLDRLIHNVKIEDDSDMIRNWSHLGVPIVPPSQQAKPLRKDRSAEETFQLSRWTPFIKDIMEDAI 486

  Fly   482 KGRELD-------PLFPAI--NSELVPFRRPPQ------------EVVVFIIGGATYEEALAVHQ 525
            ..| ||       ...||:  .|..|..|:.|:            .:::|:|||.||.|....::
Mouse   487 DNR-LDSKEWPYCSRCPAVWNGSGAVSARQKPRTNYLELDRKNGSRLIIFVIGGITYSEMRCAYE 550

  Fly   526 LNNA--GYKVILGGTTIHNSQSFIQEV 550
            ::.|  ..:||:|.|.|...:..:.::
Mouse   551 VSQAHKSCEVIIGSTHILTPRKLLDDI 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 156/587 (27%)
Stxbp3NP_035634.1 Mediates interaction with DOC2B. /evidence=ECO:0000269|PubMed:17548353 1..255 71/253 (28%)
Sec1 33..570 CDD:395791 156/587 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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