DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and Stxbp1

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001107041.1 Gene:Stxbp1 / 20910 MGIID:107363 Length:603 Species:Mus musculus


Alignment Length:590 Identity:119/590 - (20%)
Similarity:255/590 - (43%) Gaps:98/590 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANEL 87
            |::::|:.:..::|.....:|::...:.:.|  |..:..|.|..|:.:..|.|:::::..|.::.
Mouse    29 KVLVVDQLSMRMLSSCCKMTDIMTEGITIVE--DINKRREPLPSLEAVYLITPSEKSVHSLISDF 91

  Fly    88 RNP---KYSAYYIYFSNIIPRTDIKYLAECDESESVREVKELYADYLCVNPNLFSLGIPNCMANL 149
            ::|   ||.|.:::|::..|......|.:...::.::.:.|:...:|.....::||...:...:.
Mouse    92 KDPPTAKYRAAHVFFTDSCPDALFNELVKSRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSF 156

  Fly   150 NWLP-------DALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQITKESSLFDFRS 207
             :.|       ..|.|..:.|..:..:||..|.:|||...:...|||:||.:::....:......
Mouse   157 -YSPHKAQMKNPILERLAEQIATLCATLKEYPAVRYRGEYKDNALLAQLIQDKLDAYKADDPTMG 220

  Fly   208 NMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVPKDFKELVLSGDQ 272
            .....|...||:|||..||.:|:||:.|:|||.::||.|:|:..............||::|..| 
Mouse   221 EGPDKARSQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARVKEVLLDED- 284

  Fly   273 DDFYGNNMYANYGEIGSTIKQLMEEF--QRKANDHKKVESIADMKNFIESYPQFKKMSGTVQKHL 335
            ||.:....:.:..|:...:.:.:::|  .::.|..:|. ::.|:...::..||::|         
Mouse   285 DDLWIALRHKHIAEVSQEVTRSLKDFSSSKRMNTGEKT-TMRDLSQMLKKMPQYQK--------- 339

  Fly   336 CVIGELSALSNKRNLFE------------VSELEQEIACKAEHSAQ-----LQRIKKLIADERVS 383
                |||..|...:|.|            :..:||::|...:...:     ::.|..::.|..||
Mouse   340 ----ELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVS 400

  Fly   384 IDDALKLVALYALRYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLF-NMVR--- 444
            ..|.::::.||                 |....|.....:..||::|.......::. ||..   
Mouse   401 TYDKIRIILLY-----------------IFLKNGITEENLNKLIQHAQIPPEDSEIITNMAHLGV 448

  Fly   445 --ITDAVKLTRNLIKGLKGV-ENVF--TQHTPLLKETLEDVFKGRELDPLFPAI----------- 493
              :||:....|:..:..:.: |..:  ::.||::|:.:||..:.:.....:|.|           
Mouse   449 PIVTDSTLRRRSKPERKERISEQTYQLSRWTPIIKDIMEDTIEDKLDTKHYPYISTRSSASFSTT 513

  Fly   494 -----------NSELVPFRRPPQEVVVFIIGGATYEEALAVHQLN--NAGYKVILGGTTIHNSQS 545
                       |.....:|..|: :::||:||.:..|....:::.  |..::|::|.|.|.....
Mouse   514 AVSARYGHWHKNKAPGEYRSGPR-LIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPTK 577

  Fly   546 FIQEV 550
            |:.::
Mouse   578 FLMDL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 118/581 (20%)
Stxbp1NP_001107041.1 Sec1 29..575 CDD:395791 118/581 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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