DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps45 and T07A9.10

DIOPT Version :9

Sequence 1:NP_649909.1 Gene:Vps45 / 41153 FlyBaseID:FBgn0261049 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_499918.1 Gene:T07A9.10 / 176862 WormBaseID:WBGene00020298 Length:562 Species:Caenorhabditis elegans


Alignment Length:597 Identity:128/597 - (21%)
Similarity:256/597 - (42%) Gaps:143/597 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IILLDKETTSIISMAFSQSDMLQREVYLFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANELR 88
            :::|||....:::...|.:::.:..|.|.|  |..|:.|.:..:..|..|.|..::|.:|.|:..
 Worm    31 VLVLDKSAMVVVNSCLSLNEVFEEGVTLVE--DLTRNREPMPSMDAIYIISPVAESIDILINDFS 93

  Fly    89 -----NP--KYSAYYIYFSNIIPRTDIKYLAECDE-----SES-----VREVKELYADYLCVNPN 136
                 ||  .|.:.:|:|.:..          |||     |:|     ::.:|||..:...|...
 Worm    94 RKTKFNPGNSYRSAHIFFLDPC----------CDELFEKLSKSPAVKWIKTLKELNLNLKPVESQ 148

  Fly   137 LFSLGIPNCMANLNWLPDALNRSMQGITAVLLSLKLNPVIRYRAG-SQAAQLLAKLIYEQITKES 200
            :|::       |..:..| :.::..||.::..:|.::|.:|:::. :|::::..::       |.
 Worm   149 IFTV-------NSQFRGD-MTKTADGIVSLCATLNIHPTLRFQSDFAQSSEICQRV-------EQ 198

  Fly   201 SLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNRLDLSNCPNVPKDFKE 265
            .|.:| .|........|:||||..|.|:||||:.|.||||.::...|:.....:..    .|.||
 Worm   199 KLKEF-GNEGMGTDAELVVLDRSFDLVSPLLHEVTLQAMVVDVTAFKDGVYRYTEA----GDSKE 258

  Fly   266 LVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQRKANDHK------KVESIADMKNFIESYPQF 324
            :||. ::|..:.:..:....|:..::.:::::|:   |.:|      |.:|..|....:.:...:
 Worm   259 IVLD-EKDQNWLDLRHKLLPEVMKSVNKMVKDFK---NTNKTEPENIKNQSSKDFSTTVRTLQPY 319

  Fly   325 KKMSGTVQKHLCVIGELSALSNKRNLFEVSELEQEIACKAEHSAQLQRIKKLIADERVS------ 383
            .||...:..::.:..|..: ....:|.::..|||::|  .||:.:..||....|..|:|      
 Worm   320 LKMKAKMAAYISLTEECRS-KYFDSLEKIIALEQDMA--VEHTPEHVRITDSQAVGRLSTFILPA 381

  Fly   384 --IDDALKLVALYAL-----RYERHANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLFN 441
              .:..|:|:.::.|     :.|::.|                     .|:.:  |.:.:.: |.
 Worm   382 IPTETRLRLILIFMLTIGKDKDEQYFN---------------------RLLHH--TDIPESE-FQ 422

  Fly   442 MVRITDAVKLTRNLIKGLKGVENVFTQH---------------TPLLKETLEDVFKGRELD---- 487
            :::        |.||...|..::.| ||               .|.:|..:|:::: |.||    
 Worm   423 IIK--------RMLIWRDKTQKSQF-QHRRPPPEDERFIASRWDPKIKNLIEEIYE-RRLDEREF 477

  Fly   488 ---------PLFPAIN----SELVPFRRPPQEVVVFIIGGATYEEALAVHQLN-NAGYKVILGGT 538
                     ...||.:    |.|....|..:::::|::||.||.|....::|: .....||||..
 Worm   478 KVAGKKSTSDFRPAASARYGSGLAGKPREKRKIIIFVVGGITYSEMRVAYELSKKTNTTVILGSD 542

  Fly   539 TIHNSQSFIQEV 550
            .|....||::.:
 Worm   543 EILTPSSFLESL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps45NP_649909.1 Sec1 23..543 CDD:279352 126/588 (21%)
T07A9.10NP_499918.1 Sec1 31..547 CDD:279352 126/588 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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