DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9393 and cdr-7

DIOPT Version :9

Sequence 1:NP_649908.1 Gene:CG9393 / 41152 FlyBaseID:FBgn0037710 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001294724.1 Gene:cdr-7 / 24104698 WormBaseID:WBGene00010472 Length:281 Species:Caenorhabditis elegans


Alignment Length:262 Identity:55/262 - (20%)
Similarity:103/262 - (39%) Gaps:62/262 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LYVYKGEYGLPSIDFECLRALCLLRFTRCPMDVQTSSNPLRSGAGKLPYLQIGNQKFAGYRQIKR 73
            ||.::.....|::...|::...:.|....|.:|...:..|||.:|.||::::..:..:.      
 Worm    50 LYQFRRLKNCPNMSPFCMKIEIICRIYGIPYEVVIENAKLRSRSGTLPFIELNEEHISD------ 108

  Fly    74 VLDLEGYPIDAH-----LSTKQKHLSTAYANWVFTNL-HAY--YH------YFLFGEPHNFDTTT 124
             .||....:..|     ||.:::..:|:.:..|..:| |..  ||      |:.|.:..:|.:  
 Worm   109 -SDLIEIRLRQHFKLPMLSLEEEAQATSLSRMVDNHLFHILMRYHCADDIFYYTFLDLLDFKS-- 170

  Fly   125 RGLYAKRTPFPFNFYYPSSYQREACDVVQVMAGFDVNDKLDKHEGDY-------LVVNAKKVVNL 182
               |......||               ::::.|..:........||:       |:....:||..
 Worm   171 ---YVIPLILPF---------------MKMIIGGKIYQNSTSAIGDFEPAELDELLHRDLRVVET 217

  Fly   183 LSRKLGRKVWFFGDTYSEFDAIVYSYLAIIFKIALPNNPLQNHI-----KGCQNLVNFINRITKD 242
            :   ||.|.:.|||..:..||.|:|.||:::      .|...||     .....::.:..||.|:
 Worm   218 I---LGNKKYLFGDHIAPVDATVFSQLAVVY------YPFYTHISTVLENDFPKILQYCERIRKE 273

  Fly   243 IF 244
            |:
 Worm   274 IY 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9393NP_649908.1 GST_N_Metaxin1_like 8..79 CDD:239376 15/69 (22%)
GST_C_Metaxin1_3 108..244 CDD:198321 32/155 (21%)
cdr-7NP_001294724.1 GST_N_Metaxin_like 48..121 CDD:239378 16/77 (21%)
GstA 61..271 CDD:223698 49/245 (20%)
GST_C_Metaxin 201..271 CDD:198302 19/78 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1472286at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.