Protein Alignment MBD-like and Mbd3

DIOPT Version :10

• Sequence 1: NP_001262421.1
• Gene: MBD-like / 41151
• FlyBaseID: FBgn0027950
• Length: 340
• Species: Drosophila melanogaster
• Sequence 2: NP_001426429.1
• Gene: Mbd3 / 362834
• RGDID: 1307389
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 348
• Identity: 118/348 - (33%)
• Similarity: 168/348 - (48%)
• Gaps: 95/348 - (27%)

  Fly     9 IERKRVDCSVLPKGWQRDEV-RKSGSSANNNASSNNNSSATASSNNNNNKVDVFYYSSPTGKRAE 72
            :||||.:|..||:||:|:|| |:||.||.:.                    ||||| ||:||:..
  Rat     1 MERKRWECPALPQGWEREEVPRRSGLSAGHR--------------------DVFYY-SPSGKKFR 44

  Fly    73 GKPQ---------DIAIPDFQPGKMPHCALPSPSISLYRCSAMPLPIASGGGNGATSGSAANAL- 127
            .|||         |::..||:.|||                                  ..|.:
  Rat    45 SKPQLARYLGGSMDLSTFDFRTGKM----------------------------------LMNKMN 75

  Fly   128 -KRKFARSQGGNAAGA-----AGAAPPAATASSAATATAASASPSTANRQQQQIELSRALRTDVS 186
             .|:..|....|...|     .|.:.|:.|...||.....|        .|.:.:|:.||
  Rat    76 KSRQRVRYDSSNQVKALAKHLPGPSNPSWTPVGAARCRVFS--------PQGKPDLNTAL----- 127

  Fly   187 LVPPIRQTASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWEKRLERLRACHDSGEEL-D 250
               |:||||||||||||.|.||..:  |.|::|:... ::|:||||||:|..|.| .|..||| .
  Rat   128 ---PVRQTASIFKQPVTKITNHPSN--KVKSDPQKAV-DQPRQLFWEKKLSGLSA-FDIAEELVR 185

  Fly   251 DISLPKTIRTVGPNVNEQTVLQSVATALHMLNAGVHGQSSTKADLTKNAMAFMNPEQPLMHAVII 315
            .:.|||.::.|||...::|:|.::|:|||.....:.||.|  |.:.||...::|..|||..|.::
  Rat   186 TMDLPKGLQGVGPGCTDETLLSAIASALHTSTLPITGQLS--AAVEKNPGVWLNTAQPLCKAFMV 248

  Fly   316 SEDDIRKQEDRVGVARRKLQDAL 338
            ::|||||||:.|...|::|::||
  Rat   249 TDDDIRKQEELVQQVRKRLEEAL 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MBD-like	NP_001262421.1	MBD	9..101	CDD:396147	35/101 (35%)
		MBDa	171..241	CDD:465179	32/69 (46%)
		MBD_C	245..338	CDD:464072	36/93 (39%)
Mbd3	NP_001426429.1	None