powered by:
Protein Alignment MBD-like and mbd-2
DIOPT Version :9
| Sequence 1: | NP_001262421.1 |
Gene: | MBD-like / 41151 |
FlyBaseID: | FBgn0027950 |
Length: | 340 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001021012.1 |
Gene: | mbd-2 / 3565704 |
WormBaseID: | WBGene00023409 |
Length: | 210 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 171 |
Identity: | 43/171 - (25%) |
| Similarity: | 76/171 - (44%) |
Gaps: | 23/171 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 191 IRQTASIFKQPVTVIRNHKQDPAKAKNE------PKHGTREKPKQLFWEKRLERLRAC--HDSGE 247
:|:..:.|.|.|:.:.. .|...|.:|: .:..|..:|.|..|.|.|..|:.. |:..:
Worm 38 VRKCPTTFSQHVSEVTT-AQPETKVQNDELLKRRSRRKTEMRPFQAMWAKSLSGLQVSIPHEKPD 101
Fly 248 ELDDISLP-------KTIRTVGPNVNEQTVLQSVATALHMLN-----AGVHGQSSTKADLTKNAM 300
.:.|:... |.|..:.|.|:..|..:::.|.:..:| .|..||::.|..|..|.:
Worm 102 RIGDVKKAEYSYESIKKISLIKPGVSAFTPEEAMTTVIQQMNNGFMTNGTFGQAANKDKLDVNFI 166
Fly 301 AFMNPEQPLMHAVIISE--DDIRKQEDRVGVARRKLQDALK 339
.....:|||...:.|:. ::|..||.||..||::||:.:|
Worm 167 GLALHDQPLCERIPIAHIVEEISSQEKRVLDARKRLQEVMK 207
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MBD-like | NP_001262421.1 |
MBD |
13..98 |
CDD:279737 |
|
| MBDa |
172..241 |
CDD:293172 |
14/55 (25%) |
| MBD_C |
246..338 |
CDD:290755 |
27/105 (26%) |
| mbd-2 | NP_001021012.1 |
MBD_C |
113..206 |
CDD:372891 |
26/92 (28%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4161 |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1431783at2759 |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_105834 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR12396 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
1 |
0.960 |
- |
- |
|
|
|
7 | 6.780 |
|
Return to query results.
Submit another query.
