DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and HAP13

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_176277.1 Gene:HAP13 / 842372 AraportID:AT1G60780 Length:428 Species:Arabidopsis thaliana


Alignment Length:426 Identity:256/426 - (60%)
Similarity:345/426 - (80%) Gaps:6/426 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLIT-PILQTAETTFAYIKTNN 65
            ::||:|:||:||:||:.|:|||| :..|..::|...|:|:|.:.... |:......|:.:::.:|
plant     4 AASALFLLDIKGRVLVWRDYRGD-VSAAQAERFFTKLIEKEGDSQSNDPVAYDNGVTYMFVQHSN 67

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            :|::..:  .:|.|.|.:..|||::..||..||:||||||:|||||::||||||::||||||.|:
plant    68 VYLMIAS--RQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTE 130

  Fly   131 SKILQEYITQEGHKLELQPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRSE 195
            ::||.|:|..:.:::|:..|.|:|||||||||||||:|:||||||||||:||:|.|:||.::||:
plant   131 ARILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFLDVIENVNILVNSNGQIVRSD 195

  Fly   196 IVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG-KSKSVELEDVKFHQCVRLSRFENDRTISFIP 259
            :|||:|||.||:||||.:|||||:||.|:.||. |.|:::|||:||||||||:||||||||||||
plant   196 VVGALKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDIKFHQCVRLARFENDRTISFIP 260

  Fly   260 PDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADS 324
            |||.|:||:|||:|.||||||:|:.||.|:.||||.:|||:||||.||||.||||.:|||.||.:
plant   261 PDGAFDLMTYRLSTQVKPLIWVEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPVPTDASN 325

  Fly   325 PKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNT-EGKPPIQVRFEIPYF 388
            |..:|::||..||||::|::|.||||||.|||::||.|.|||:.:|:.| |.|.||:|:||||||
plant   326 PTVRTSLGSASYAPEKDALVWKIKSFPGNKEYMLRAEFHLPSITAEEATPERKAPIRVKFEIPYF 390

  Fly   389 TTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 424
            |.||||||||||||||||||||||||||..|:|:||
plant   391 TVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 61/141 (43%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 191/272 (70%)
HAP13NP_176277.1 AP1_Mu_N 6..145 CDD:341439 61/141 (43%)
AP-1_Mu1_Cterm 156..426 CDD:271158 188/269 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 396 1.000 Domainoid score I140
eggNOG 1 0.900 - - E1_KOG0937
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4017
Inparanoid 1 1.050 537 1.000 Inparanoid score I267
OMA 1 1.010 - - QHG54006
OrthoDB 1 1.010 - - D725236at2759
OrthoFinder 1 1.000 - - FOG0001611
OrthoInspector 1 1.000 - - otm3513
orthoMCL 1 0.900 - - OOG6_101263
Panther 1 1.100 - - LDO PTHR10529
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1021
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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