DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and AT1G10730

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_172543.1 Gene:AT1G10730 / 837616 AraportID:AT1G10730 Length:428 Species:Arabidopsis thaliana


Alignment Length:426 Identity:245/426 - (57%)
Similarity:338/426 - (79%) Gaps:6/426 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLIT-PILQTAETTFAYIKTNN 65
            ::||:|:||:||:||:.|:|||| :..|..::|...|:|.|.:.... |:......|:.:::.:|
plant     4 AASALFLLDIKGRVLVWRDYRGD-VTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSN 67

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            :|::..:  .:|.|.|.:..|||::..||..||:||||||:|||||::||||||::||||||.|:
plant    68 IYLMIAS--RQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTE 130

  Fly   131 SKILQEYITQEGHKLELQPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRSE 195
            ::||.|:|..:.:::|:..|.|:||||:|||||||:|::|||||||||||||:|.|:||.::||:
plant   131 ARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSD 195

  Fly   196 IVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG-KSKSVELEDVKFHQCVRLSRFENDRTISFIP 259
            :|||:|||.|||||||.:|||||::|.|:.||. |.|:::|||:||||||||:||||||||||||
plant   196 VVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIP 260

  Fly   260 PDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADS 324
            |||.|:||:|||:|.||||||:|:.||||:.||||.::||:||||.||.|.:|||.:|||.||.:
plant   261 PDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYN 325

  Fly   325 PKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNT-EGKPPIQVRFEIPYF 388
            |..:|::||..||||::|::|.|:.|.|.||:.::|.|.|||:.:|:.| |.|.||:|:||||.|
plant   326 PDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKF 390

  Fly   389 TTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 424
            ..||||||||||||||||||.|||||||..|:|:||
plant   391 IVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 61/141 (43%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 180/272 (66%)
AT1G10730NP_172543.1 AP1_Mu_N 6..145 CDD:341439 61/141 (43%)
AP-1_Mu1_Cterm 156..426 CDD:271158 177/269 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 396 1.000 Domainoid score I140
eggNOG 1 0.900 - - E1_KOG0937
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4017
Inparanoid 1 1.050 537 1.000 Inparanoid score I267
OMA 1 1.010 - - QHG54006
OrthoDB 1 1.010 - - D725236at2759
OrthoFinder 1 1.000 - - FOG0001611
OrthoInspector 1 1.000 - - otm3513
orthoMCL 1 0.900 - - OOG6_101263
Panther 1 1.100 - - LDO PTHR10529
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1021
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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