DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and ap1m2

DIOPT Version :10

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001006851.1 Gene:ap1m2 / 448603 XenbaseID:XB-GENE-946863 Length:423 Species:Xenopus tropicalis


Alignment Length:427 Identity:321/427 - (75%)
Similarity:383/427 - (89%) Gaps:5/427 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYIKTNN 65
            ||:||:::||:|||.||.|||:|| |||..||.|||||:::|||..:||:|...:..|.:||.:|
 Frog     1 MSASAVYILDLKGKPLICRNYKGD-IDMLEIDHFMPLLVQKEEESNLTPLLTHGKVHFMWIKHSN 64

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            ||:|:.|  |||.|.:||:.||:|:.:||.|||||||||||||||||:||||||::|||:||||:
 Frog    65 LYLVALT--NKNANASLVYSFLYKLIEVFTEYFKELEEESIRDNFVIVYELLDEIMDFGFPQTTE 127

  Fly   131 SKILQEYITQEGHKLEL-QPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRS 194
            ||||||||||:|:||:. :.|:|..||||||||||||||:|||||:|||||||:|.|:||:||||
 Frog   128 SKILQEYITQQGNKLDTGKSRVPTTVTNAVSWRSEGIKYKKNEVFIDVIESVNILVNSNGSVLRS 192

  Fly   195 EIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIP 259
            ||||::|::|:|||||||||||||:||||.|||.|:|:|||||||||||||||||||||||||||
 Frog   193 EIVGSVKLKVFLSGMPELRLGLNDRVLFELTGRNKNKTVELEDVKFHQCVRLSRFENDRTISFIP 257

  Fly   260 PDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADS 324
            |||:||||||||||.||||||||||||:.:|||:|.|:|||.|||::|.||||||.:|||:||||
 Frog   258 PDGDFELMSYRLNTQVKPLIWIESVIEKFSHSRLEIMVKAKGQFKKQSVANNVEISVPVPSDADS 322

  Fly   325 PKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFT 389
            |||||::||.||.||:|.:|||||||||||||||||||||||||:|: .||||||.|:|||||||
 Frog   323 PKFKTSVGSAKYVPEKNVVIWTIKSFPGGKEYLMRAHFGLPSVETEE-LEGKPPISVKFEIPYFT 386

  Fly   390 TSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTN 426
            .|||||||:|||||||||||||||||||:||||||||
 Frog   387 VSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTN 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 90/140 (64%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 222/269 (83%)
ap1m2NP_001006851.1 AP1_Mu_N 4..142 CDD:341439 90/140 (64%)
AP-1_Mu1B_Cterm 154..421 CDD:271167 220/267 (82%)

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