DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and ap1m3

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001107913.1 Gene:ap1m3 / 445244 ZFINID:ZDB-GENE-040801-159 Length:423 Species:Danio rerio


Alignment Length:427 Identity:322/427 - (75%)
Similarity:370/427 - (86%) Gaps:5/427 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYIKTNN 65
            |::||||:||:||||||.|||.| ||||.|||.|||::|:||||..::|::....|.|.:||.:|
Zfish     1 MAASAIFILDLKGKVLICRNYMG-NIDMNVIDNFMPIMMKREEEAELSPVVIHGSTHFLWIKHSN 64

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            ||:|:.|  .||.|.|||:.||:|:.:||.||||.|||||||||||.:|||:||::|||:|||||
Zfish    65 LYLVAMT--KKNTNAALVYSFLYKLVEVFTEYFKSLEEESIRDNFVTVYELMDEVMDFGFPQTTD 127

  Fly   131 SKILQEYITQEGHKLEL-QPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRS 194
            ||||.|||||:|||||: .||.|..||||||||||||||||||||:|||||||||.:|.|:||||
Zfish   128 SKILLEYITQQGHKLEVGAPRPPATVTNAVSWRSEGIKYRKNEVFMDVIESVNLLVSATGSVLRS 192

  Fly   195 EIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIP 259
            ||:|.||::|.||||||||||||||||||.|||.|:|||||||||||||||||||||||||||||
Zfish   193 EILGCIKLKVVLSGMPELRLGLNDKVLFEITGREKTKSVELEDVKFHQCVRLSRFENDRTISFIP 257

  Fly   260 PDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADS 324
            ||||.|||||||||.||||||||||||:.:|||||..:||:||||.|||||||.|::|||:||||
Zfish   258 PDGESELMSYRLNTTVKPLIWIESVIEKFSHSRVEIKVKARSQFKSRSTANNVSILVPVPSDADS 322

  Fly   325 PKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFT 389
            ||||||.|..|:.||::|:.|.|||||||||::|||||||||||| |..|||.||.|:|||||||
Zfish   323 PKFKTTTGQAKWVPEKSAVEWNIKSFPGGKEFMMRAHFGLPSVES-DELEGKRPITVKFEIPYFT 386

  Fly   390 TSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTN 426
            .||||||||||||||||||||||||.||:||||||||
Zfish   387 VSGIQVRYLKIIEKSGYQALPWVRYTTQSGDYQLRTN 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 91/140 (65%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 221/269 (82%)
ap1m3NP_001107913.1 Clat_adaptor_s 5..139 CDD:261170 88/136 (65%)
AP_MHD_Cterm 153..422 CDD:299401 221/269 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 180 1.000 Domainoid score I3451
eggNOG 1 0.900 - - E1_KOG0937
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4017
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54006
OrthoDB 1 1.010 - - D246783at33208
OrthoFinder 1 1.000 - - FOG0001611
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101263
Panther 1 1.100 - - O PTHR10529
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R59
SonicParanoid 1 1.000 - - X1021
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.820

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