DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and ap4m1

DIOPT Version :10

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001002672.1 Gene:ap4m1 / 436945 ZFINID:ZDB-GENE-040718-421 Length:442 Species:Danio rerio


Alignment Length:449 Identity:134/449 - (29%)
Similarity:237/449 - (52%) Gaps:38/449 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SAIFVLDVKGKVLISRNYRG----DNIDMAVIDKFMPLLMEREEEGLITPILQT-AETTFAYIKT 63
            |.||:|..||..||.:::||    |:|:  |..:.:..|     .|...|::.| .:..|.:::.
Zfish     3 SQIFILSSKGDHLIYKDFRGEASKDSIN--VFYEMVTAL-----SGDQPPVVMTHKDLHFIHVRQ 60

  Fly    64 NNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQT 128
            ..||.|::|..|.:.  ..:..||:::|.:..:|...|.|:|:|.||.:|||||||::||||.||
Zfish    61 GGLYWVASTKTNPSP--FTIIEFLNRLAALTKDYCGSLSEKSVRMNFALIYELLDEMVDFGYVQT 123

  Fly   129 TDSKILQEYITQE------------------GHKLELQPRIPVAVTNAVSWRSEGIKYRKNEVFL 175
            |.:.||:.:|..|                  |.:.:.....|....:.....|.|.:..|||:|:
Zfish   124 TSTDILKNFIQTEAVSSKPFSLFDLSNVGLFGAETQQSKVAPSVAASRPIMSSRGEQGGKNEIFV 188

  Fly   176 DVIESVNLLANANGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKV-LFESTGRGKSKSVELEDVK 239
            ||||.::::..:||.:::|:|.|.|:::.:|....|:|:|||::: :.:|..:|.|.:|.:::.:
Zfish   189 DVIERLSVVIGSNGVLMKSDIQGEIRIKCFLPTCSEMRIGLNEELNIGKSQLKGYSSAVRVDECR 253

  Fly   240 FHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHV--KPLIWIESVIERHAHSRVEYMIKAKSQ 302
            |||.|:|..|:..|.:...|..||..:|.|:|...:  .|...:...:|:...:||...:|.:..
Zfish   254 FHQAVKLDEFDTFRILKVCPSQGEQTIMQYQLCDELPCAPPFQLFPSVEKDYVNRVLIFLKLRCD 318

  Fly   303 FKRRSTANNVEIVIPVP--ADADSPKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLP 365
            ...:|||.||.|.:|||  :.:.|.:..:...:.:..|:..|::|.|..||||.:.....:..:|
Zfish   319 LPPKSTALNVSITVPVPKGSVSMSQELSSPDQTAELQPKNKALLWEIPRFPGGAQLSALFNVEVP 383

  Fly   366 SVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 424
            .:.|....| ..|:.:.||:|..|.:|:|:|:|::.......:..||||:|.:..|.:|
Zfish   384 GLSSASLLE-VGPVSMSFELPKQTCTGLQIRFLRLSPTQTGLSQRWVRYVTHSDSYTIR 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 52/163 (32%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 81/275 (29%)
ap4m1NP_001002672.1 AP4_Mu_N 3..140 CDD:341442 51/145 (35%)
AP-4_Mu4_Cterm 174..442 CDD:271161 81/269 (30%)

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