DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and AP-2mu

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001163686.1 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster


Alignment Length:441 Identity:187/441 - (42%)
Similarity:266/441 - (60%) Gaps:31/441 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYIKTNNLYIVS 70
            :||.:.||:|||||.|| |:|....:|.|...::...:: :.:|:...|.|:|.:||..|:::.:
  Fly     5 LFVYNHKGEVLISRVYR-DDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKRANIWLAA 67

  Fly    71 TTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTDSKILQ 135
            .|  .:|||.|:||.||.||.:|...||.::.||:|::|||:|||||||:|||||||.|||..|:
  Fly    68 VT--KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNTDSGTLK 130

  Fly   136 EYITQEGHK---LELQPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRSEIV 197
            .:|||:|.|   .|.|.:|...||..:.||.||||||:||:||||:|.||||.:..|.||.:.:.
  Fly   131 TFITQQGIKS
ATKEEQMQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVA 195

  Fly   198 GAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVE------------LEDVKFHQCVRLSRFE 250
            |.:.|:.|||||||.:.|:|||::.||.|||.|.:.|            ::|.:|||||:||:||
  Fly   196 GKVVMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPVVVIDDCQFHQCVKLSKFE 260

  Fly   251 NDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIV 315
            .:.:|||||||||||||.||....:.....:..::.....:::|..:..||.||.......:|:.
  Fly   261 TEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVK 325

  Fly   316 IPVPADADSPKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGK---P 377
            ||.|.:....:.....|..||...:|||:|.||...|.||..:.|...|    .|.:|:.|   |
  Fly   326 IPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIEL----LETDTKKKWTRP 386

  Fly   378 PIQVRFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 424
            ||.:.||:| |..||.:|||||:.|.    |.:..:.|||||.::|.|:.|
  Fly   387 PISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETR 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 65/141 (46%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 119/289 (41%)
AP-2muNP_001163686.1 AP2_Mu_N 1..140 CDD:341440 64/138 (46%)
AP-2_Mu2_Cterm 166..436 CDD:271159 110/274 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439806
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47352at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10529
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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