DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and Ap4m1

DIOPT Version :10

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_063127348.1 Gene:Ap4m1 / 304344 RGDID:1310233 Length:465 Species:Rattus norvegicus


Alignment Length:474 Identity:128/474 - (27%)
Similarity:227/474 - (47%) Gaps:65/474 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SAIFVLDVKGKVLISRNYRGDNIDMAVIDKF-----------MPLLMERE---EEGLITPILQTA 54
            |..|:|..||..||.:::|||:....|.:.|           .|::|...   |:||.|   ...
  Rat     3 SQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGGESPVVMVTTVAGEQGLRT---YHD 64

  Fly    55 ETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDE 119
            :..|.:|:.:.||:|:||  ::||:...:...|.::|.:..:|...|.|.:|..|..::||||||
  Rat    65 DRHFIHIRHSGLYLVATT--SENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDE 127

  Fly   120 LLDFGYPQTTDSKILQEYITQE------------------GHKLELQPRIPVAVTNAVSWRSEGI 166
            :||:||.|||.:.:|:.:|..|                  |.:.:.....|.:..:.....|...
  Rat   128 VLDYGYVQTTSTDMLRNFIQTEAAVSKPFSLFDLSSVGLFGAETQQNRVAPSSAASRPVLSSRSD 192

  Fly   167 KYRKNEVFLDVIESVNLLANANGNVLRSEIVGAIKMRVYLSGMPELRLGLNDK-VLFESTGRGKS 230
            :.:||||||||:|.:::|..:||::|:.::.|.|:::.:|....|:.:||.:: .:.:|..||..
  Rat   193 QSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSSSEICIGLTEEFCVGKSELRGYG 257

  Fly   231 KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVK---PLIWIESVIERHAHSR 292
            ..:.:::|.||..|.|..||:.|.:...||.||..:|.|:|:..:.   |.....||.......|
  Rat   258 PGIRVDEVSFHSSVNLDEFESHRILHLQPPQGELTVMRYQLSDDLPSPLPFRLFPSVQWDQGSGR 322

  Fly   293 VEYMIKAKSQFKRRSTANNVEIVIPVP-------ADADSPKFKTTIGSCKYAPEQNAIIWTIKSF 350
            ::..:|.:.....:|.|.|:.:.:|:|       .:..||..|..:|       :.|:.|.:...
  Rat   323 LQVYLKLRCDLPPKSQALNIHLHLPLPRGVVSLSQELSSPDQKAELG-------EGALHWDLPRV 380

  Fly   351 PGGKEYLMRAHFGLPSVESEDNTEGKP--------PIQVRFEIPYFTTSGIQVRYLKIIEKSGYQ 407
            .||.:........:|.::...:....|        |..:.||:|..|.||:|||:|::...:...
  Rat   381 QGGSQLSGLFQMDVPGLQGPPSRGPSPSAPPLGLGPASLSFELPRHTCSGLQVRFLRLSFSACGN 445

  Fly   408 ALP--WVRYITQNGDYQLR 424
            |.|  |||:::.:..|.:|
  Rat   446 ANPHKWVRHLSHSNAYVIR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 51/172 (30%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 76/291 (26%)
Ap4m1XP_063127348.1 None

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